wip: claude code and avante

This may be a mistake. We'll see.

.cabal/config

@@ -1,69 +0,0 @@
--- This is the configuration file for the 'cabal' command line tool.
-
--- The available configuration options are listed below.
--- Some of them have default values listed.
-
--- Lines (like this one) beginning with '--' are comments.
--- Be careful with spaces and indentation because they are
--- used to indicate layout for nested sections.
-
-
-remote-repo: hackage.haskell.org:http://hackage.haskell.org/packages/archive
-remote-repo-cache: /Users/jwall/.cabal/packages
--- local-repo:
--- verbose: 1
--- compiler: ghc
--- with-compiler:
--- with-hc-pkg:
--- scratchdir:
--- program-prefix: 
--- program-suffix: 
--- library-vanilla: True
--- library-profiling: True
--- shared: False
--- executable-profiling: True
--- optimization: True
--- library-for-ghci: True
--- split-objs: False
--- executable-stripping: True
--- user-install: True
--- package-db:
--- flags:
--- extra-include-dirs:
--- extra-lib-dirs:
--- constraint:
--- cabal-lib-version:
--- preference:
--- documentation: False
--- doc-index-file: $datadir/doc/index.html
--- root-cmd:
--- symlink-bindir:
-build-summary: /Users/jwall/.cabal/logs/build.log
--- build-log:
-remote-build-reporting: anonymous
--- username:
--- password:
-
-install-dirs user
-  -- prefix: /Users/jwall/.cabal
-  -- bindir: $prefix/bin
-  -- libdir: $prefix/lib
-  -- libsubdir: $pkgid/$compiler
-  -- libexecdir: $prefix/libexec
-  -- datadir: $prefix/share
-  -- datasubdir: $pkgid
-  -- docdir: $datadir/doc/$pkgid
-  -- htmldir: $docdir/html
-  -- haddockdir: $htmldir
-
-install-dirs global
-  -- prefix: /usr/local
-  -- bindir: $prefix/bin
-  -- libdir: $prefix/lib
-  -- libsubdir: $pkgid/$compiler
-  -- libexecdir: $prefix/libexec
-  -- datadir: $prefix/share
-  -- datasubdir: $pkgid
-  -- docdir: $datadir/doc/$pkgid
-  -- htmldir: $docdir/html
-  -- haddockdir: $htmldir

.hammerspoon/.mjolnir

@@ -1 +0,0 @@
-C:/Users/jwall/.mjolnir

.hammerspoon/init.lua

@@ -1,133 +0,0 @@
-local mash = {"cmd", "alt", "ctrl"}
-
-hs.hotkey.bind(mash, "R", function() mjolnir.reload() end)
-
--- Make the window fullscreen
-hs.hotkey.bind(mash, "F", function()
-  local win = hs.window.focusedWindow()
-  if win then win:maximize() end
-end)
-
--- Move the window to the right 5 pixels
-hs.hotkey.bind(mash, "L", function()
-  local win = hs.window.focusedWindow()
-  local screen = win:screen()
-  local scrfrm = screen:frame()
-  if win then
-     f = win:frame()
-     local nx = f.x + 5
-     if (f.w + nx) <= scrfrm.w then
-        f.x = nx
-        win:setFrame(f)
-     else
-        f.x = scrfrm.w
-     end
-  end
-end)
-
--- Move the window to the left 5 pixels
-hs.hotkey.bind(mash, "H", function()
-  local win = hs.window.focusedWindow()
-  local screen = win:screen()
-  local scrfrm = screen:frame()
-  if win then
-     f = win:frame()
-     local nx = f.x - 5
-     if nx >= scrfrm.x then
-        f.x = nx
-        win:setFrame(f)
-     else
-        f.x = scrfrm.x
-     end
-  end
-end)
-
--- Move the window down 5 pixels
-hs.hotkey.bind(mash, "J", function()
-  local win = hs.window.focusedWindow()
-  local screen = win:screen()
-  local scrfrm = screen:frame()
-  if win then
-     f = win:frame()
-     local ny = f.y + 5
-     if (ny + f.h) <= scrfrm.h then
-        f.y = ny
-        win:setFrame(f)
-     else
-        f.y = scrfrm.h
-     end
-  end
-end)
-
--- Move the window up 5 pixels
-hs.hotkey.bind(mash, "K", function()
-  local win = hs.window.focusedWindow()
-  local screen = win:screen()
-  local scrfrm = screen:frame()
-  if win then
-     f = win:frame()
-     local ny = f.y - 5
-     if ny >= scrfrm.y then
-        f.y = ny
-        win:setFrame(f)
-     else
-        f.y = scrfrm.y
-     end
-  end
-end)
-
--- Center the window
-hs.hotkey.bind(mash, "C", function()
-    local win = hs.window.focusedWindow()
-    if win then
-       win:centerOnScreen()
-    end
-end)
-
--- Move window all the way to the up
-hs.hotkey.bind(mash, "up", function()
-    local win = hs.window.focusedWindow()
-    local screen = win:screen()
-    local scrfrm = screen:frame()
-    if win then
-       f = win:frame()
-       f.y = 0
-       win:setFrame(f)
-    end
-end)
-
--- Move window all the way to the left
-hs.hotkey.bind(mash, "left", function()
-    local win = hs.window.focusedWindow()
-    local screen = win:screen()
-    local scrfrm = screen:frame()
-    if win then
-       f = win:frame()
-       f.x = 0
-       win:setFrame(f)
-    end
-end)
-
--- Move window all the way to the down
-hs.hotkey.bind(mash, "down", function()
-    local win = hs.window.focusedWindow()
-    local screen = win:screen()
-    local scrfrm = screen:frame()
-    if win then
-       f = win:frame()
-       f.y = scrfrm.h - f.h
-       win:setFrame(f)
-    end
-end)
-
--- Move window all the way to the right
-hs.hotkey.bind(mash, "right", function()
-    local win = hs.window.focusedWindow()
-    local screen = win:screen()
-    local scrfrm = screen:frame()
-    if win then
-       f = win:frame()
-       f.x = scrfrm.w - f.w
-       win:setFrame(f)
-    end
-end)

.luarc.json

@@ -1,5 +1,11 @@
 {
     "diagnostics.disable": [
         "missing-fields"
+    ],
+    "diagnostics.globals": [
+        "vim",
+        "make_avante_system_prompt",
+        "update_avante_system_prompt",
+        "get_server_list_prompt"
     ]
 }

.screenrc

@@ -1,12 +0,0 @@
-startup_message off
-defscrollback 5000
-termcapinfo xterm ti@:te@
-termcapinfo xterm-color ti@:te@
-hardstatus alwayslastline
-hardstatus string '%{= kG}[ %{G}%H %{g}][%= %{= kw}%?%-Lw%?%{r}(%{W}%n*%f%t%?(%u)%?%{r})%{w}%?%+Lw%?%?%= %{g}][%{B} %m/%d/%Y %{W}%c %{g}]'
-vbell off
-shell /bin/bash 
-logtstamp on
-logtstamp after 1
-logfile flush
-term screen-256color

.xmonad/xmonad.hs

@@ -1,47 +0,0 @@
-import Control.Monad
-
-import XMonad
-import XMonad.Hooks.DynamicLog
-import XMonad.Hooks.ManageDocks
-import XMonad.Layout
-import XMonad.Layout.Column
-import XMonad.Layout.LayoutBuilder
-import XMonad.Config.Desktop
-import XMonad.Hooks.SetWMName
-import qualified XMonad.StackSet as W
-import XMonad.Util.EZConfig
-import XMonad.Util.Run(spawnPipe)
-
-import System.IO
-
-mkLayout n = layoutN n mainBox (Just overFlowBox) layout overflowLayout
-  where
-        mainHeight = 0.75 -- Main window height
-        mainWidth = 0.68 -- Main window width
-        row = Mirror $ Column 1 -- a row of windows
-        layout = Tall 1 0.03 mainWidth -- Top row layout
-        overflowLayout = layoutAll (relBox 0 mainHeight 1 1) row -- bottom row layout
-        mainBox = relBox 0 0 1 mainHeight -- Main box
-        overFlowBox = relBox 0 0 1 1 -- Bottom row
-
-myLayout = ((mkLayout 2) ||| (mkLayout 1)) ||| Full
-
-myGmRunCommand = "gmrun 'rxvt'"
-
-main = do
-  xmproc <- spawnPipe "xmobar"
-  xmonad  $ desktopConfig {
-     terminal            = "/usr/bin/rxvt"
-     , focusFollowsMouse = False
-     , layoutHook        = avoidStruts myLayout
-     , logHook = dynamicLogWithPP $ xmobarPP
-        { ppLayout = xmobarColor "grey" "black" . (\ x -> pad "")
-          , ppOutput = hPutStrLn xmproc
-        }
-     , workspaces        = ["code", "communication", "random", "configuration"]
-    } `additionalKeys` [
-     ((mod1Mask, xK_w), kill)
-     , ((controlMask .|. mod1Mask, xK_Delete), spawn "gnome-screensaver-command --lock")
-     , ((mod1Mask .|. shiftMask, xK_p), spawn myGmRunCommand) -- %! Launch gmrun
-     , ((mod1Mask , xK_p), spawn myGmRunCommand) -- %! Launch gmrun
-      ]

.yi/yi.hs

@@ -1,122 +0,0 @@
--- |
--- Author  : jeremy@marzhillstudios.com
-
--- Parts of this config were stolen from/inspired by
--- yi/yi-contrib/src/Yi/Config/Michal.hs.
-
-import Yi
-import qualified Yi.Keymap.Vim as Vim
-import qualified Yi.Keymap.Vim.Common as Vim
-import qualified Yi.Keymap.Vim.Utils as Vim
-import Yi.Keymap.Keys
-import Yi.Modes
-import Yi.Style
-import Yi.Style.Library
-import Yi.Config.Default (availableFrontends)
-import Yi.Config.Misc
-
-import Data.Monoid
-
--- TODO(jwall): :<num> navigation
--- TODO(jwall): handle file updates: checktime functionality
--- TODO(jwall): Visual Mode is broken?
-
--- default color specifications
-fgColor = brightwhite
-bgColor = black
-bgSelectedColor = lightGrey
-
-builtinColor = magenta
-commentColor = darkcyan
-typeColor = darkgreen
-keywordColor = yellow
-quoteColor = magenta
-
--- extended vim keymap
-myKeymap :: KeymapSet
-myKeymap = Vim.mkKeymapSet $ Vim.defVimConfig `override` \super self ->
-  let eval = Vim.pureEval self
-  in super {
-          -- put our custom bindings first so they override default bindings
-          Vim.vimBindings = myBindings eval <> Vim.vimBindings super
-      }
-
--- custom keybindings
-myBindings :: (Vim.EventString -> EditorM ()) -> [Vim.VimBinding]
-myBindings eval =
-    let nmap  x y = Vim.mkStringBindingE Vim.Normal Vim.Drop (x, y, id)
-        imap  x y = Vim.VimBindingE (\evs state -> case Vim.vsMode state of
-                                    Vim.Insert _ ->
-                                        fmap (const (y >> return Vim.Continue))
-                                             (evs `Vim.matchesString` x)
-                                    _ -> Vim.NoMatch)
-        nmap'  x y = Vim.mkStringBindingY Vim.Normal (x, y, id)
-    in [
-        -- custom bindings here
-       ]
-
--- GUI enhanced colors
-guiBgColor = RGB 20 20 20
-
-defaultVimTermTheme :: Theme
-defaultVimTermTheme = defaultTheme  `override` \super self -> super {
-        modelineAttributes = emptyAttributes {foreground = white,
-                                              background = grey},
-        modelineFocusStyle = withBg grey `mappend` withFg fgColor,
-        baseAttributes = emptyAttributes { foreground = fgColor,
-                                           background = bgColor},
-        builtinStyle = withFg builtinColor,
-        commentStyle = withFg commentColor,
-        typeStyle = withFg typeColor,
-        importStyle = withFg keywordColor,
-        selectedStyle = withBg bgSelectedColor,
-        stringStyle = withFg quoteColor,
-        keywordStyle = withFg green
- }
-
-defaultVimGuiTheme :: Theme
-defaultVimGuiTheme = defaultVimTermTheme  `override` \super self -> super {
-        baseAttributes = emptyAttributes { foreground = fgColor,
-                                           background = guiBgColor}
-}
-
--- global indent preferences
-prefIndent :: Mode s -> Mode s
-prefIndent m = m {
-        modeIndentSettings = IndentSettings
-            {
-                  expandTabs = True
-                , shiftWidth = 2
-                , tabSize = 2
-            }
-}
-
-myDefaultUI = configUI defaultVimConfig
-
-myConfigDefaultUI :: UIConfig
-myConfigDefaultUI = myDefaultUI {
-          configFontSize = Just 9
-        , configTheme = defaultVimGuiTheme
-        , configWindowFill = '~'
- }
-
-myConfigTermUI :: UIConfig -- reuse the above defaults here
-myConfigTermUI = myConfigDefaultUI {
-        configTheme = defaultVimTermTheme
- }
-
-myDefaultConfig = defaultVimConfig {
-          configUI  = myConfigDefaultUI
-        , defaultKm = myKeymap
-        , modeTable = fmap (onMode prefIndent) (modeTable defaultVimConfig)
-}
-
-myConfig =
-  case availableFrontends of
-    (("vty", f):_) -> myDefaultConfig {
-          configUI  = myConfigTermUI
-      }
-    ((_, f):_) -> myDefaultConfig
-
-main :: IO ()
-main = yi myConfig

Makefile

@@ -1,2 +1,5 @@
 %-darwin:
-	darwin-rebuild --flake ./nix/base-system $*
+	sudo darwin-rebuild --flake ./nix/base-system $*
+
+update-input-%:
+	nix flake update $* ./nix/base-system/

docker-compose.yaml

@@ -1,283 +0,0 @@
----
-version: "3.5"
-
-networks:
-  penpot:
-
-volumes:
-  penpot_postgres_v15:
-  penpot_assets:
-  # penpot_traefik:
-  # penpot_minio:
-
-services:
-  ## Traefik service declaration example. Consider using it if you are going to expose
-  ## penpot to the internet or different host than `localhost`.
-
-  # traefik:
-  #   image: traefik:v2.9
-  #   networks:
-  #     - penpot
-  #   command:
-  #     - "--api.insecure=true"
-  #     - "--entryPoints.web.address=:80"
-  #     - "--providers.docker=true"
-  #     - "--providers.docker.exposedbydefault=false"
-  #     - "--entryPoints.websecure.address=:443"
-  #     - "--certificatesresolvers.letsencrypt.acme.tlschallenge=true"
-  #     - "--certificatesresolvers.letsencrypt.acme.email=<EMAIL_ADDRESS>"
-  #     - "--certificatesresolvers.letsencrypt.acme.storage=/traefik/acme.json"
-  #   volumes:
-  #     - "penpot_traefik:/traefik"
-  #     - "/var/run/docker.sock:/var/run/docker.sock"
-  #   ports:
-  #     - "80:80"
-  #     - "443:443"
-
-  penpot-frontend:
-    image: "penpotapp/frontend:latest"
-    ports:
-      - 9001:80
-
-    volumes:
-      - penpot_assets:/opt/data/assets
-
-    depends_on:
-      - penpot-backend
-      - penpot-exporter
-
-    networks:
-      - penpot
-
-    labels:
-      - "traefik.enable=true"
-
-      ## HTTP: example of labels for the case if you are going to expose penpot to the
-      ## internet using only HTTP (without HTTPS) with traefik
-
-      # - "traefik.http.routers.penpot-http.entrypoints=web"
-      # - "traefik.http.routers.penpot-http.rule=Host(`<DOMAIN_NAME>`)"
-      # - "traefik.http.services.penpot-http.loadbalancer.server.port=80"
-
-      ## HTTPS: example of labels for the case if you are going to expose penpot to the
-      ## internet using with HTTPS using traefik
-
-      # - "traefik.http.middlewares.http-redirect.redirectscheme.scheme=https"
-      # - "traefik.http.middlewares.http-redirect.redirectscheme.permanent=true"
-      # - "traefik.http.routers.penpot-http.entrypoints=web"
-      # - "traefik.http.routers.penpot-http.rule=Host(`<DOMAIN_NAME>`)"
-      # - "traefik.http.routers.penpot-http.middlewares=http-redirect"
-      # - "traefik.http.routers.penpot-https.entrypoints=websecure"
-      # - "traefik.http.routers.penpot-https.rule=Host(`<DOMAIN_NAME>`)"
-      # - "traefik.http.services.penpot-https.loadbalancer.server.port=80"
-      # - "traefik.http.routers.penpot-https.tls=true"
-      # - "traefik.http.routers.penpot-https.tls.certresolver=letsencrypt"
-
-    ## Configuration envronment variables for frontend the container. In this case this
-    ## container only needs the `PENPOT_FLAGS`. This environment variable is shared with
-    ## other services but not all flags are relevant to all services.
-
-    environment:
-      ## Relevant flags for frontend:
-      ## - demo-users
-      ## - login-with-github
-      ## - login-with-gitlab
-      ## - login-with-google
-      ## - login-with-ldap
-      ## - login-with-oidc
-      ## - login-with-password
-      ## - registration
-      ## - webhooks
-      ##
-      ## You can read more about all available flags on:
-      ## https://help.penpot.app/technical-guide/configuration/#advanced-configuration
-
-      - PENPOT_FLAGS=enable-registration enable-login-with-password
-
-  penpot-backend:
-    image: "penpotapp/backend:latest"
-    volumes:
-      - penpot_assets:/opt/penpot/assets
-
-    depends_on:
-      - penpot-postgres
-      - penpot-redis
-
-    networks:
-      - penpot
-
-    ## Configuration envronment variables for backend the
-    ## container.
-
-    environment:
-
-      ## Relevant flags for backend:
-      ## - demo-users
-      ## - email-verification
-      ## - log-emails
-      ## - log-invitation-tokens
-      ## - login-with-github
-      ## - login-with-gitlab
-      ## - login-with-google
-      ## - login-with-ldap
-      ## - login-with-oidc
-      ## - login-with-password
-      ## - registration
-      ## - secure-session-cookies
-      ## - smtp
-      ## - smtp-debug
-      ## - telemetry
-      ## - webhooks
-      ## - prepl-server
-      ##
-      ## You can read more about all available flags and other
-      ## environment variables for the backend here:
-      ## https://help.penpot.app/technical-guide/configuration/#advanced-configuration
-
-      - PENPOT_FLAGS=enable-registration enable-login-with-password disable-email-verification enable-smtp enable-prepl-server
-
-      ## Penpot SECRET KEY. It serves as a master key from which other keys for subsystems
-      ## (eg http sessions) are derived.
-      ##
-      ## Leave it comment if it is ok for you to have to login again after each backend
-      ## restart.
-      ##
-      ## If you going to uncomment this, we recommend use here a trully randomly generated
-      ## 512 bits base64 encoded string.  You can generate one with:
-      ##
-      ## python3 -c "import secrets; print(secrets.token_urlsafe(64))"
-
-      # - PENPOT_SECRET_KEY=my-insecure-key
-
-      ## The PREPL host. Mainly used for external programatic access to penpot backend
-      ## (example: admin). By default it listen on `localhost` but if you are going to use
-      ## the `admin`, you will need to uncomment this and set the host to `0.0.0.0`.
-
-      # - PENPOT_PREPL_HOST=0.0.0.0
-
-      ## Public URI. If you are going to expose this instance to the internet and use it
-      ## under different domain than 'localhost', you will need to adjust it to the final
-      ## domain.
-      ##
-      ## Consider using traefik and set the 'disable-secure-session-cookies' if you are
-      ## not going to serve penpot under HTTPS.
-
-      - PENPOT_PUBLIC_URI=http://localhost:9001
-
-      ## Database connection parameters. Don't touch them unless you are using custom
-      ## postgresql connection parameters.
-
-      - PENPOT_DATABASE_URI=postgresql://penpot-postgres/penpot
-      - PENPOT_DATABASE_USERNAME=penpot
-      - PENPOT_DATABASE_PASSWORD=penpot
-
-      ## Redis is used for the websockets notifications. Don't touch unless the redis
-      ## container has different parameters or different name.
-
-      - PENPOT_REDIS_URI=redis://penpot-redis/0
-
-      ## Default configuration for assets storage: using filesystem based with all files
-      ## stored in a docker volume.
-
-      - PENPOT_ASSETS_STORAGE_BACKEND=assets-fs
-      - PENPOT_STORAGE_ASSETS_FS_DIRECTORY=/opt/data/assets
-
-      ## Also can be configured to to use a S3 compatible storage
-      ## service like MiniIO. Look below for minio service setup.
-
-      # - AWS_ACCESS_KEY_ID=<KEY_ID>
-      # - AWS_SECRET_ACCESS_KEY=<ACCESS_KEY>
-      # - PENPOT_ASSETS_STORAGE_BACKEND=assets-s3
-      # - PENPOT_STORAGE_ASSETS_S3_ENDPOINT=http://penpot-minio:9000
-      # - PENPOT_STORAGE_ASSETS_S3_BUCKET=<BUKET_NAME>
-
-      ## Telemetry. When enabled, a periodical process will send anonymous data about this
-      ## instance. Telemetry data will enable us to learn on how the application is used,
-      ## based on real scenarios. If you want to help us, please leave it enabled. You can
-      ## audit what data we send with the code available on github
-
-      - PENPOT_TELEMETRY_ENABLED=true
-
-      ## Example SMTP/Email configuration. By default, emails are sent to the mailcatch
-      ## service, but for production usage is recommended to setup a real SMTP
-      ## provider. Emails are used to confirm user registrations & invitations. Look below
-      ## how mailcatch service is configured.
-
-      - PENPOT_SMTP_DEFAULT_FROM=no-reply@example.com
-      - PENPOT_SMTP_DEFAULT_REPLY_TO=no-reply@example.com
-      - PENPOT_SMTP_HOST=penpot-mailcatch
-      - PENPOT_SMTP_PORT=1025
-      - PENPOT_SMTP_USERNAME=
-      - PENPOT_SMTP_PASSWORD=
-      - PENPOT_SMTP_TLS=false
-      - PENPOT_SMTP_SSL=false
-
-  penpot-exporter:
-    image: "penpotapp/exporter:latest"
-    networks:
-      - penpot
-
-    environment:
-      # Don't touch it; this uses internal docker network to
-      # communicate with the frontend.
-      - PENPOT_PUBLIC_URI=http://penpot-frontend
-
-      ## Redis is used for the websockets notifications.
-      - PENPOT_REDIS_URI=redis://penpot-redis/0
-
-  penpot-postgres:
-    image: "postgres:15"
-    restart: always
-    stop_signal: SIGINT
-
-    volumes:
-      - penpot_postgres_v15:/var/lib/postgresql/data
-
-    networks:
-      - penpot
-
-    environment:
-      - POSTGRES_INITDB_ARGS=--data-checksums
-      - POSTGRES_DB=penpot
-      - POSTGRES_USER=penpot
-      - POSTGRES_PASSWORD=penpot
-
-  penpot-redis:
-    image: redis:7
-    restart: always
-    networks:
-      - penpot
-
-  ## A mailcatch service, used as temporal SMTP server. You can access via HTTP to the
-  ## port 1080 for read all emails the penpot platform has sent. Should be only used as a
-  ## temporal solution meanwhile you don't have a real SMTP provider configured.
-
-  penpot-mailcatch:
-    image: sj26/mailcatcher:latest
-    restart: always
-    expose:
-      - '1025'
-    ports:
-      - "1080:1080"
-    networks:
-      - penpot
-
-  ## Example configuration of MiniIO (S3 compatible object storage service); If you don't
-  ## have preference, then just use filesystem, this is here just for the completeness.
-
-  # minio:
-  #   image: "minio/minio:latest"
-  #   command: minio server /mnt/data --console-address ":9001"
-  #
-  #   volumes:
-  #     - "penpot_minio:/mnt/data"
-  #
-  #   environment:
-  #     - MINIO_ROOT_USER=minioadmin
-  #     - MINIO_ROOT_PASSWORD=minioadmin
-  #
-  #   ports:
-  #     - 9000:9000
-  #     - 9001:9001
-
-

nix/base-system/.zshrc

@@ -1,19 +0,0 @@
-set -o vi
-export PROMPT='%F{green}[%T] %F{cyan}(%n@%m) %F{lightgrey}(%y) %F{cyan} %~
-%F{white}%(!.>>.$>) '
-
-# Alwoys use C-R for history search backward
-bindkey '^R' history-incremental-search-backward
-
-# Opam configurattion
-[[ ! -r ~/.opam/opam-init/init.zsh ]] || source ~/.opam/opam-init/init.zsh  > /dev/null 2> /dev/null
-
-# dotnet stuff
-if [ -f "$HOME/Library/Application Support/dnvm/env" ]; then
-    . "$HOME/Library/Application Support/dnvm/env"
-fi
-
-function service_restart() {
-	launchctl stop $1
-	launchctl start $1
-}

nix/base-system/d2.nix

@@ -1,54 +0,0 @@
-{ lib
-, buildGoModule
-, fetchFromGitHub
-, installShellFiles
-, git
-, testers
-, d2
-}:
-
-buildGoModule rec {
-  pname = "d2";
-  version = "0.6.3";
-
-  src = fetchFromGitHub {
-    owner = "terrastruct";
-    repo = pname;
-    rev = "v${version}";
-    hash = "sha256-GImv4OJHanj6dKtAJpTaGLrR4AaVTboiYHwRdh/gXaU";
-  };
-
-  vendorHash = "sha256-T7eki06fQuGvYIJKvBJsIkFS1fQ9Jbv+ieUSr2vupqg=";
-
-  excludedPackages = [ "./e2etests" ];
-
-  ldflags = [
-    "-s"
-    "-w"
-    "-X oss.terrastruct.com/d2/lib/version.Version=v${version}"
-  ];
-
-  nativeBuildInputs = [ installShellFiles ];
-
-  postInstall = ''
-    installManPage ci/release/template/man/d2.1
-  '';
-
-  nativeCheckInputs = [ git ];
-
-  preCheck = ''
-    # See https://github.com/terrastruct/d2/blob/master/docs/CONTRIBUTING.md#running-tests.
-    export TESTDATA_ACCEPT=1
-  '';
-
-  passthru.tests.version = testers.testVersion {
-    package = d2;
-    version = "v${version}";
-  };
-
-  meta = with lib; {
-    description = "A modern diagram scripting language that turns text to diagrams";
-    homepage = "https://d2lang.com";
-    license = licenses.mpl20;
-  };
-}

nix/base-system/darwin-configuration.nix

@@ -1,13 +1,18 @@
 { pkgs, config, lib, ... }:
+let
+    vfkit = pkgs.callPackage ../packages/vfkit.nix {};
+in
 {
 
   nix = {
     package = pkgs.nix;
+    enable = true;
     # SEE: https://github.com/NixOS/nix/issues/4119#issuecomment-1734738812
     settings.sandbox = "relaxed";
     extraOptions = ''
-      experimental-features = nix-command flakes repl-flake
+      experimental-features = nix-command flakes
       extra-platforms = x86_64-darwin aarch64-darwin x86_64-linux
+      trusted-users = root zaphar
     '';
   };
 
@@ -28,18 +33,23 @@
   ];
 
   # TODO(zaphar): Move this to a module.
-  launchd.user.agents.ipfs = {
-    serviceConfig = {
-      ProgramArguments = [
-        "${pkgs.kubo}/bin/ipfs"
-        "daemon"
-        "--init"
-      ];
-      KeepAlive = true;
-      RunAtLoad = true;
-    };
-  };
+  #launchd.user.agents.ipfs = {
+  #  serviceConfig = {
+  #    ProgramArguments = [
+  #      "${pkgs.kubo}/bin/ipfs"
+  #      "daemon"
+  #      "--init"
+  #    ];
+  #    KeepAlive = true;
+  #    RunAtLoad = true;
+  #  };
+  #};
 
+  services.ollama = {
+    enable = true;
+    user="zaphar";
+  };
+  services.my-lorri.enable = true;
   services.durnitisp.enable = true;
   services.node-exporter.enable = true;
   services.prometheus.enable = true;
@@ -144,6 +154,16 @@
                                 yaxis = "y1";
                             };
                         }
+                        {
+                            source = "http://${config.services.prometheus.listen}";
+                            query = ''
+                                delta(ping_counter{result="dropped"}[5m])
+                            '';
+                            config = {
+                                name_format = "`icmp \${labels.domain} drop count`";
+                                yaxis = "y1";
+                            };
+                        }
                     ];
                 }
                 {
@@ -189,6 +209,7 @@
         data_dir = "/var/lib/vector";
         api = {
             enabled = true;
+            address = "127.0.0.1:8686";
         };
         sources = {
             prometheus = {
@@ -227,8 +248,14 @@
                 type = "file";
                 include = [
                     "/var/log/system.log"
+                    "/var/log/com.apple.xpc.launchd/launchd.log"
                 ];
             };
+            syslog_source = {
+                type = "exec";
+                command = ["/usr/bin/log" "stream" "--style" "ndjson"];
+                mode = "streaming";
+            };
         };
         transforms = {
             durnitisp_no_tty = {
@@ -240,9 +267,56 @@
                   .message = strip_ansi_escape_codes(.message) ?? .message
                 '';
             };
+            syslog = {
+                type = "remap";
+                inputs = [
+                    "syslog_source"
+                ];
+                source = ''
+                  .message = parse_json(.message) ?? .message
+                  del(.command)
+                  .syslog
+                  .eventType = .message.eventType
+                  .processImagePath = .message.processImagePath
+                '';
+            };
         };
         sinks = {
-            victoria = {
+            victoria_vector = {
+                type = "elasticsearch";
+                mode = "bulk";
+                endpoints = [
+                    "http://${config.services.victoria-logs.listenAddr}/insert/elasticsearch"
+                ];
+                inputs = [
+                    "vector"
+                ];
+                api_version = "v8";
+                healthcheck.enabled = false;
+                query = {
+                    _msg_field = "message";
+                    _time_field = "timestamp";
+                    _stream_fields = "host,source_type";
+                };
+            };
+            victoria_syslog = {
+                type = "elasticsearch";
+                mode = "bulk";
+                endpoints = [
+                    "http://${config.services.victoria-logs.listenAddr}/insert/elasticsearch"
+                ];
+                inputs = [
+                    "syslog"
+                ];
+                api_version = "v8";
+                healthcheck.enabled = false;
+                query = {
+                    _msg_field = "message";
+                    _time_field = "timestamp";
+                    _stream_fields = "host,processImagePath,eventType";
+                };
+            };
+            victoria_files = {
                 type = "elasticsearch";
                 mode = "bulk";
                 endpoints = [
@@ -252,7 +326,6 @@
                     "prometheus"
                     #"heracles"
                     "durnitisp_no_tty"
-                    "vector"
                     "victoria-logs"
                     "system"
                 ];
@@ -267,13 +340,13 @@
         };
     };
 
-  # TODO launchd.user.agents.prometheus;
   # Use a custom configuration.nix location.
   # $ darwin-rebuild switch -I darwin-config=$HOME/.config/nixpkgs/darwin/configuration.nix
   # environment.darwinConfig = "$HOME/.config/nixpkgs/darwin/configuration.nix";
-
-  # Auto upgrade nix package and the daemon service.
-  services.nix-daemon.enable = true;
+  environment.systemPackages = [
+    # Required on darwin for podman machine to work.
+    vfkit
+  ];
 
   #services.spacebar.enable = true;
   #services.spacebar.package = "${pkgs.spacebar}";
@@ -290,6 +363,7 @@
         (allow file-read* file-write* process-exec mach-lookup (subpath "${builtins.storeDir}"))
       '';
     };
+    system.primaryUser = "zaphar";
   # Used for backwards compatibility, please read the changelog before changing.
   # $ darwin-rebuild changelog
   system.stateVersion = 4;

nix/base-system/flake.nix

@@ -1,18 +1,19 @@
 {
   inputs = {
     # Default to sane nixpkgs versions
-    nixpkgs.url = "github:nixos/nixpkgs/24.05";
+    nixpkgs.url = "github:nixos/nixpkgs/release-25.05";
     unstable.url = "nixpkgs";
-    nixpkgs-darwin.url = "github:nixos/nixpkgs/nixpkgs-24.05-darwin";
+    nixpkgs-darwin.url = "github:nixos/nixpkgs/nixpkgs-25.05-darwin";
     #lean4-flake = { 
     #  url = "github:leanprover/lean4/v4.4.0";
     #  inputs.nixpkgs.follows = "nixpkgs";
     #};
     darwin = {
-      url = "github:lnl7/nix-darwin";
+      url = "github:lnl7/nix-darwin/nix-darwin-25.05";
       # ensure that darwinSystem uses our nixpkgs version
       inputs.nixpkgs.follows = "nixpkgs-darwin";
     };
+    sheetsui-flake.url = "github:zaphar/sheetsui";
     sile-flake.url = "github:sile-typesetter/sile";
     durnitisp-flake.url = "github:zaphar/durnitisp";
     runwhen-flake.url = "github:zaphar/runwhen";
@@ -30,15 +31,15 @@
       inputs.nixpkgs.follows = "nixpkgs";
     };
 
-    neovim-flake = {
-        url = "github:neovim/neovim/stable?dir=contrib";
-        # NOTE(jeremy): Currently this needs a newer nixpkgs version
-        #inputs.nixpkgs.follows = "nixpkgs";
-    };
-
-    harpoon-src = {
-        url = "github:ThePrimeagen/harpoon/harpoon2";
-        flake = false;
+    #neovim-flake = {
+    #    url = "github:neovim/neovim/stable?dir=contrib";
+    #    # NOTE(jeremy): Currently this needs a newer nixpkgs version
+    #    #inputs.nixpkgs.follows = "nixpkgs";
+    #};
+    jujutsu-flake.url = "github:martinvonz/jj";
+    custom-flakes = {
+        url = "github:zaphar/nix-flakes";
+        inputs.nixpkgs.follows = "nixpkgs";
     };
     neogit-src = {
         url = "github:NeogitOrg/neogit";
@@ -48,77 +49,61 @@
         url = "github:terrastruct/d2-vim";
         flake = false;
     };
-    # We need to pin to this version of treesitter because it breaks after this revision
-    treesitter-context = {
-        url = "github:nvim-treesitter/nvim-treesitter-context/e6b743ccd4e780bc9cd85b707de67df72eea1a23";
-        flake = false;
-    };
     roslyn-lsp = {
         url = "github:zaphar/roslyn.nvim/main";
         flake = false;
     };
     heracles-flake.url = "github:zaphar/Heracles";
+    mcphub-flake.url = "github:ravitemer/mcphub.nvim/v5.0.1";
   };
 
   outputs = {
     darwin,
     sile-flake,
+    jujutsu-flake,
     runwhen-flake,
     durnitisp-flake,
     rust-overlay-flake,
     agenix-flake,
     nil-flake,
     nurl-flake,
-    harpoon-src,
-    neogit-src,
-    d2-vim-src,
-    treesitter-context,
-    roslyn-lsp,
-    #lean4-flake,
+    custom-flakes,
     unstable,
     heracles-flake,
-    neovim-flake,
     clio-flake,
+    sheetsui-flake,
+    mcphub-flake,
     ... # We don't use the self or nixpkgs args here so we just glob it.
   }: 
   rec {
     vimModule = system: let
       nil-pkg = nil-flake.packages."${system}".default;
+      mcp-hub-binary = custom-flakes.packages."${system}".mcp-hub;
+      claude-code-binary = custom-flakes.packages."${system}".claude-code;
     in
     { config, pkgs, ...}: let
-        possession-nvim = pkgs.callPackage ./possession-nvim.nix {
-            inherit (pkgs.vimUtils) buildVimPlugin;
-			inherit (pkgs) fetchFromGitHub;
-        };
-        harpoon-nvim = pkgs.vimUtils.buildVimPlugin {
-          pname = "harpoon";
-          version = "2024-01-28";
-          src = harpoon-src;
-        };
-        neogit-nvim = pkgs.vimUtils.buildVimPlugin {
-          pname = "neogit";
-          version = "2024-05-16";
-          src = neogit-src;
-        };
-        d2-vim =  pkgs.vimUtils.buildVimPlugin {
-          pname = "d2-nvim";
-          version = "2024-01-28";
-          src = d2-vim-src;
-        };
-        nvim-treesitter-context = pkgs.vimUtils.buildVimPlugin {
-            name = "nvim-treesitter-context";
-            src = treesitter-context;
-        };
-        roslyn-nvim = pkgs.vimUtils.buildVimPlugin {
-            name = "roslyn-nvim";
-            src = roslyn-lsp;
-        };
-        nvim = neovim-flake.packages."${system}".neovim;
+        unstablePkgs = import unstable { inherit system; };
+        neogit-nvim = custom-flakes.packages."${system}".neogit-nvim;
+        d2-vim = custom-flakes.packages."${system}".d2-vim;
+        hunk-nvim = custom-flakes.packages."${system}".hunk-nvim;
+        # TODO(zaphar): Apparently this is a remote plugin so it needs some additional love.
+        #nvim-bnf = custom-flakes.packages."${system}".nvim-bnf;
+        roslyn-nvim = custom-flakes.packages."${system}".roslyn-nvim;
+        ionide-nvim = custom-flakes.packages."${system}".ionide-nvim;
+        claude-code-nvim = custom-flakes.packages."${system}".claude-code-nvim;
+        # TODO(zaphar): Until nixpkgs update to a newer version of tree-sitter the queries will be wrong
+        # for csharp
+        #tree-sitter-csharp = pkgs.callPackage ./nvim-treesitter-csharp.nix {
+        #  inherit (pkgs.neovimUtils) grammarToPlugin;
+		    #  inherit (pkgs.tree-sitter) buildGrammar;
+			  #  inherit (pkgs) fetchFromGitHub;
+        #};
         # TODO(jwall): When this actually builds we should use it.
-		#nvim-treesitter-powershell = pkgs.callPackage ./nvim-powershell.nix {
-		#    inherit (pkgs.tree-sitter) buildGrammar;
-		#	inherit (pkgs) fetchFromGitHub;
-		#};
+		    #nvim-treesitter-powershell = pkgs.callPackage ./nvim-powershell.nix {
+		    #    inherit (pkgs.tree-sitter) buildGrammar;
+		    #	inherit (pkgs) fetchFromGitHub;
+		    #};
+        mcphub-nvim = mcphub-flake.packages."${system}".default;
     in {
       imports = [
         ./program-neovim.nix
@@ -132,94 +117,117 @@
      
         nixpkgs.overlays = [
             (final: prev: {
-                custom-neovim = nvim;
+                lorri = unstablePkgs.lorri;
             })
         ];
-        programs = with pkgs; {
+        programs = with unstablePkgs; {
           neovim.enable = true;
           neovim.vimAlias = true;
           neovim.viAlias = true;
-          neovim.package = pkgs.custom-neovim;
+          neovim.package = unstablePkgs.neovim-unwrapped;
           neovim.configure = {
-            customRC = "lua << EOF
+          customRC = "lua << EOF
 ${builtins.readFile ./init.lua}
 EOF";
-            packages.myVimPackage = {
-              start = (with pkgs.vimPlugins; [
-                nvim-tree-lua
-                nvim-lspconfig
-                packer-nvim
-                vim-ps1
-                vim-lsp
-                vim-vsnip
-                nvim-cmp
-                cmp-nvim-lua
-                cmp-nvim-lsp
-                cmp-vsnip
-                cmp-buffer
-                cmp-path
-                cmp-nvim-lsp-signature-help
-                nvim-dap # Debug Adapter Protocol support
-                #nvim-dap-ui
-                hoon-vim
-                nvim-treesitter
-                lean-nvim
-                roslyn-nvim
-                nvim-treesitter-context
-                nvim-treesitter-textobjects
-				nvim-treesitter-parsers.ini
-				nvim-treesitter-parsers.rust
-				nvim-treesitter-parsers.c
-				nvim-treesitter-parsers.c_sharp
-				nvim-treesitter-parsers.cpp
-				nvim-treesitter-parsers.clojure
-				nvim-treesitter-parsers.latex
-				nvim-treesitter-parsers.terraform
-				nvim-treesitter-parsers.hcl
-				nvim-treesitter-parsers.yaml
-				nvim-treesitter-parsers.lua
-				nvim-treesitter-parsers.vim
-				nvim-treesitter-parsers.go
-				nvim-treesitter-parsers.toml
-				nvim-treesitter-parsers.tlaplus
-				nvim-treesitter-parsers.typescript
-				nvim-treesitter-parsers.starlark
-				nvim-treesitter-parsers.python
-				nvim-treesitter-parsers.sql
-				nvim-treesitter-parsers.javascript
-				nvim-treesitter-parsers.ocaml
-				nvim-treesitter-parsers.haskell
-				nvim-treesitter-parsers.css
-				nvim-treesitter-parsers.promql
-				nvim-treesitter-parsers.nix
-				nvim-treesitter-parsers.hoon
-                omnisharp-extended-lsp-nvim
-                #neotest-dotnet
-                nix-develop-nvim
-                trouble-nvim
-                nightfox-nvim
-                melange-nvim
-                telescope-nvim
-                telescope-lsp-handlers-nvim
-                plenary-nvim
-                vim-dadbod
-                vim-dadbod-ui
-                vim-dadbod-completion
-              ]) ++ [ possession-nvim harpoon-nvim d2-vim neogit-nvim ];
-            };
+          packages.myVimPackage = {
+            start = (with pkgs.vimPlugins; [
+              copilot-lua
+              avante-nvim
+              vim-sile
+              nvim-tree-lua
+              nvim-lspconfig
+              packer-nvim
+              vim-ps1
+              vim-lsp
+              vim-vsnip
+              nvim-cmp
+              cmp-nvim-lua
+              cmp-nvim-lsp
+              cmp-vsnip
+              cmp-buffer
+              cmp-path
+              cmp-nvim-lsp-signature-help
+              nvim-dap # Debug Adapter Protocol support
+              #nvim-dap-ui
+              hoon-vim
+              nvim-treesitter
+              lualine-nvim
+              lualine-lsp-progress
+              lean-nvim
+              roslyn-nvim
+              ionide-nvim # Fsharp lsp support
+              nvim-treesitter-context
+              nvim-treesitter-textobjects
+				      nvim-treesitter-parsers.ini
+				      nvim-treesitter-parsers.ebnf
+				      nvim-treesitter-parsers.rust
+				      nvim-treesitter-parsers.c
+				      #nvim-treesitter-parsers.c_sharp # currently broken for some reason
+				      nvim-treesitter-parsers.cpp
+				      nvim-treesitter-parsers.clojure
+				      nvim-treesitter-parsers.latex
+				      nvim-treesitter-parsers.terraform
+				      nvim-treesitter-parsers.hcl
+				      nvim-treesitter-parsers.yaml
+				      nvim-treesitter-parsers.lua
+				      nvim-treesitter-parsers.vim
+				      nvim-treesitter-parsers.go
+				      nvim-treesitter-parsers.toml
+				      nvim-treesitter-parsers.tlaplus
+				      nvim-treesitter-parsers.typescript
+				      nvim-treesitter-parsers.starlark
+				      nvim-treesitter-parsers.python
+				      nvim-treesitter-parsers.sql
+				      nvim-treesitter-parsers.javascript
+				      nvim-treesitter-parsers.ocaml
+				      nvim-treesitter-parsers.haskell
+				      nvim-treesitter-parsers.css
+				      nvim-treesitter-parsers.promql
+				      nvim-treesitter-parsers.nix
+				      nvim-treesitter-parsers.zig
+				      nvim-treesitter-parsers.hoon
+              #omnisharp-extended-lsp-nvim
+              #neotest-dotnet
+              nix-develop-nvim
+              trouble-nvim
+              nightfox-nvim
+              melange-nvim
+              telescope-nvim
+              telescope-lsp-handlers-nvim
+              plenary-nvim
+              vim-dadbod
+              vim-dadbod-ui
+              vim-dadbod-completion
+              vim-dasht
+              direnv-vim
+              mcphub-nvim
+              claude-code-nvim
+            ]) ++ [
+              d2-vim
+              hunk-nvim
+              neogit-nvim
+              # tree-sitter-csharp.neovim-plugin # Until nixpkgs updates their nvim-treesitter config the csharp queries will be broken
+            ];
+          };
           };
         };
         environment.systemPackages = (with pkgs; [
             terraform-ls
+            tinymist
             nodePackages.typescript-language-server
             nodePackages.jsdoc
             # TODO find a version of the julia package that will install
             # on darwin and add it as an overlay
             nil-pkg
-			lua-language-server
+			      lua-language-server
             rust-analyzer
-            # TODO(jwall): This is no longer provided for darwin in nixpkgs
-            #dbeaver-bin
+            dasht
+            direnv
+            lorri
+            devenv
+            unstablePkgs.fq
+            mcp-hub-binary
+            claude-code-binary
         ]);
       };
     };
@@ -228,14 +236,14 @@ EOF";
       durnitisp = durnitisp-flake.defaultPackage."${system}";
       rust-overlay = rust-overlay-flake.overlays.default;
       sile = sile-flake.defaultPackage.${system};
+      jujutsu = jujutsu-flake.packages.${system}.jujutsu;
       age = agenix-flake.packages."${system}".default;
       nurl = nurl-flake.packages."${system}".default;
       clio = clio-flake.packages."${system}".default;
       unstablePkgs = import unstable { inherit system; };
+      sheetsui = sheetsui-flake.packages."${system}".default;
       #lean4Pkg = lean4-flake.defaultPackage."${system}";
-    in { config, pkgs, ... }: let
-        d2-lang = pkgs.callPackage ./d2.nix {};
-	in {
+    in { config, pkgs, ... }: {
       
       imports = [
         agenix-flake.nixosModules.default
@@ -252,6 +260,16 @@ EOF";
             durnitisp = durnitisp;
             clio = clio;
             victoria-logs = pkgs.callPackage ../packages/victoria-logs.nix { };
+            podman = unstablePkgs.podman;
+            podman-compose = unstablePkgs.podman-compose;
+            sc-im = unstablePkgs.sc-im;
+            gnumeric = prev.gnumeric.overrideAttrs(oldAttrs: {
+                meta.broken = false;
+            });
+            uv = unstablePkgs.uv;
+            quint = (pkgs.callPackage ../packages/quint/default.nix {})."@informalsystems/quint";
+            quint-lsp = (pkgs.callPackage ../packages/quint/default.nix {})."@informalsystems/quint-language-server";
+            ollama = unstablePkgs.ollama;
           })
           rust-overlay
         ];
@@ -268,7 +286,7 @@ EOF";
             enable = true;  # default shell on catalina
           # This is a total hack but we don't want the default clobbering it which it does if it's an empty string or null
             promptInit = "#noop";
-            interactiveShellInit = (builtins.readFile ./.zshrc);
+            interactiveShellInit = (builtins.readFile ./zshrc);
           };
 
           tmux = {
@@ -278,22 +296,17 @@ EOF";
           };
         };
         environment.systemPackages = (with pkgs; [
-            # TODO(jwall): This appears to be broken due to: https://github.com/NixOS/nixpkgs/issues/166205
-            # Should be fixed by: https://github.com/NixOS/nixpkgs/pull/282624
-            #isabelle
-            # Should be fixed by: https://github.com/NixOS/nixpkgs/pull/282624
-            #(lean4.override { stdenv = stdenv.override { allowedRequisites = null; cc = llvmPackages_11.clang; }; })
+            sheetsui
             lean4
+            quint
+            quint-lsp
             terraform # TODO(jeremy): Replace with opentofu when that is an option.
-            nomad
             oha
             nodejs
             gnumake
-            # TODO find a version of the julia package that will install
+            # TODO(zaphar): find a version of the julia package that will install
             # on darwin and add it as an overlay
-            python310
-            python310Packages.pip
-            python310Packages.virtualenv
+            uv
             emacs
             git
             mercurial
@@ -308,8 +321,8 @@ EOF";
             htop
             colima
             ghidra
-            #podman-desktop # Broken on darwin right now with electron build issues.
-            # Note that podman expects qemu to be installed in order to use the podman machine setup.
+            podman
+            podman-compose
             qemu
             lima
             rlwrap
@@ -319,8 +332,7 @@ EOF";
             alloy6
             tlaplus
             jdk
-            # TODO(zaphar): d2 is broken in latest nixpkgs
-            #d2-lang
+            d2
             plantuml-c4
             nssTools
             nomad
@@ -331,23 +343,33 @@ EOF";
             # NOTE(jwall): I include these initially for nvim telescope
             ripgrep
             fd
-            vector
+            sc-im
+            gnumeric
+            wezterm
+            wezterm.terminfo
+            #ocaml
+            #opam
+            unstablePkgs.vector
             victoriametrics
             # TODO add sonic-pi here if it supports the arch
+            unstablePkgs.dbeaver-bin
+            postgresql
+            unstablePkgs.ollama
         ])
-        ++ (with pkgs.ocamlPackages; [
-            dune_3
-            odoc
-            ocaml-lsp
-            merlin
-            utop
-        ])
+        #++ (with pkgs.ocamlPackages; [
+        #    dune_3
+        #    odoc
+        #    ocaml-lsp
+        #    merlin
+        #    utop
+        #])
         ++ [
             sile
             runwhen
             durnitisp
             age
             nurl
+            jujutsu
         ];
       };
     };
@@ -360,6 +382,8 @@ EOF";
         ./modules/darwin-monitor.nix
         ./modules/victoria-logs.nix
         ./modules/vector.nix
+        ./modules/lorri.nix
+        ./modules/ollama.nix
         ./darwin-configuration.nix
       ];
     };

nix/base-system/init.lua

@@ -16,6 +16,14 @@ vim.opt.mouse = ""
 vim.opt.tabstop = 4
 vim.opt.shiftwidth = 4
 --vim.opt.smarttab = false
+vim.opt.fileformats = "unix,dos"
+-- Recommended by Avante docs
+-- views can only be fully collapsed with the global statusline
+vim.opt.laststatus = 3
+-- formatexpr defaulted to the lsp provider by default recently
+-- which breaks `gq` and company paragraph formatting in non lsp
+-- contexts.
+vim.opt.formatexpr = ""
 
 vim.g.BASH_AuthorName = 'Jeremy Wall'
 vim.g.BASH_AuthorRef = 'jw'
@@ -28,6 +36,34 @@ vim.cmd("noswapfile")
 vim.cmd("syntax on")
 vim.cmd("filetype plugin on")
 
+vim.api.nvim_create_autocmd({ "BufEnter", "BufWinEnter" }, {
+    pattern = { "*.qnt" },
+    callback = function(args)
+        vim.lsp.start({
+            name = 'quint',
+            cmd = { 'quint-language-server', '--stdio' },
+            root_dir = vim.fs.dirname(vim.uri_from_bufnr(args.buf))
+        })
+    end,
+})
+
+vim.api.nvim_create_autocmd({ "BufNewfile", "BufRead" }, {
+    callback = function(args)
+        -- If treesitter supports this filetype then use the treesitter fold expression
+        local ft = vim.bo.filetype
+        if ft and ft ~= "" then
+            -- Safely check if a parser exists for this filetype
+            local has_parser = pcall(function() return vim.treesitter.language.inspect(ft) end)
+            if has_parser then
+                vim.wo.foldexpr = 'v:lua.vim.treesitter.foldexpr()'
+                vim.wo.foldmethod = 'expr'
+                vim.wo.foldlevel = 10
+            end
+        end
+    end,
+})
+
+
 vim.cmd([[
 au BufNewFile,BufRead *Makefile,*.mk set noexpandtab
 ]])
@@ -52,10 +88,6 @@ vim.cmd([[
 au BufNewFile,BufRead .bash_* set filetype=sh
 ]])
 
-vim.cmd([[
-au BufNewFile,BufRead *.sil set filetype=tex
-]])
-
 vim.cmd([[
 au BufNewFile,BufRead *.erl filetype indent off
 ]])
@@ -64,6 +96,19 @@ vim.cmd([[
 au BufNewFile,BufRead *.hrl filetype indent off
 ]])
 
+vim.cmd([[
+au BufNewFile,BufRead *.nix set tabstop=2 nosmarttab
+]])
+
+vim.cmd([[
+au BufNewFile,BufRead *.ebnf set filetype=ebnf
+]])
+
+
+-- Telelscope Imports
+local telescope = require('telescope')
+local telescope_builtins = require('telescope.builtin')
+local telescope_actions = require('telescope.actions')
 
 --
 --https://github.com/neovim/nvim-lspconfig/blob/master/doc/server_configurations.md
@@ -123,21 +168,30 @@ local caps = vim.tbl_deep_extend(
 
 local lspconfig = require("lspconfig")
 
+local configure_lsp = function(name, config)
+    vim.lsp.enable(name)
+    vim.lsp.config(name, config)
+end
+
+-- Typst
+configure_lsp('tinymist', {
+    capabilities = caps,
+    settings = {
+        exportPdf = "onSave",
+    },
+})
+
 -- Terraform lsp setup
-lspconfig.terraformls.setup {}
+configure_lsp('terraformls', {})
 
 -- Nix language server support
-lspconfig.nil_ls.setup {
-    --single_file_support = true,
-    --on_attach = function(client, bufnr)
-    --    -- disable the semanticTokens because it has issues.
-    --    -- client.server_capabilities.semanticTokensProvider = nil
-    --end,
+configure_lsp('nil_ls', {
     capabilities = caps,
-}
+})
 
 require('roslyn').setup({
-    on_attach = function (client, _)
+    --                    client, bufnr
+    on_attach = function(_, _)
         --vim.notify(vim.inspect(client))
     end,
     sdk_framework = "net8.0",
@@ -145,55 +199,14 @@ require('roslyn').setup({
     log_level = "Trace",
 });
 
-local vim_pid = vim.fn.getpid()
-
--- "FormatterOptions:EnableEditorConfigSupport=true"
---local omnisharp_cmd = { 'omnisharp', '--languageserver', '-v', '--hostPID', tostring(vim_pid), }
-
-local function toSnakeCase(str)
-    return string.gsub(str, "%s*[- ]%s*", "_")
-end
-
---lspconfig.omnisharp.setup {
---    cmd = omnisharp_cmd,
---    enable_roslyn_analyzers = true,
---    enable_editorconfig_support = true,
---    enable_import_completion = true,
---    -- Omnisharp has issues with the semanticTokens feature we need to massage it a bit.
---    on_attach = function(client, bufnr)
---        -- https://github.com/OmniSharp/omnisharp-roslyn/issues/2483#issuecomment-1492605642
---        local tokenModifiers = client.server_capabilities.semanticTokensProvider.legend.tokenModifiers
---        for i, v in ipairs(tokenModifiers) do
---            tokenModifiers[i] = toSnakeCase(v)
---        end
---        local tokenTypes = client.server_capabilities.semanticTokensProvider.legend.tokenTypes
---        for i, v in ipairs(tokenTypes) do
---            tokenTypes[i] = toSnakeCase(v)
---        end
---    end,
---    handlers = {
---        ["textDocument/definition"] = require('omnisharp_extended').handler,
---    },
---    capabilities = caps,
---}
-
---ocaml
-lspconfig.ocamllsp.setup {
-    capabilities = caps
-}
-
--- Java language server support
-lspconfig.java_language_server.setup {
-    capabilities = caps
-}
-
 -- Typescript language server support
-lspconfig.tsserver.setup {
+configure_lsp('tsserver', {
+    cmd = { 'typescript-language-server', '--stdio' },
     capabilities = caps
-}
+})
 
 -- Rust language server support
-lspconfig.rust_analyzer.setup {
+configure_lsp('rust_analyzer', {
     settings = {
         -- https://github.com/rust-lang/rust-analyzer/blob/master/docs/user/generated_config.adoc
         ['rust-analyzer'] = {
@@ -201,10 +214,11 @@ lspconfig.rust_analyzer.setup {
         }
     },
     capabilities = caps
-}
+})
 
 -- lua language server setup.
-lspconfig.lua_ls.setup {
+configure_lsp('lua_ls', {
+    cmd = { 'lua-language-server' },
     settings = {
         Lua = {
             runtime = { version = 'LuaJIT', },
@@ -224,7 +238,13 @@ lspconfig.lua_ls.setup {
         },
     },
     capabilities = caps
-}
+})
+
+configure_lsp('ty', {
+  cmd = { 'ty', 'server' },
+  filetypes = { 'python' },
+  root_markers = { 'ty.toml', 'pyproject.toml', '.git' },
+})
 
 -- lsp configuration
 vim.api.nvim_create_autocmd('LspAttach', {
@@ -236,16 +256,22 @@ vim.api.nvim_create_autocmd('LspAttach', {
         vim.keymap.set({ "n", "v" }, "<Leader>a", vim.lsp.buf.code_action, opts)
         vim.keymap.set("n", "<Leader>f", vim.lsp.buf.format, opts)
         local client = vim.lsp.get_client_by_id(args.data.client_id)
-        if client.server_capabilities.codelens then
+        ---@diagnostic disable-next-line: undefined-field
+        if client and client.server_capabilities.codelens then
             vim.lsp.codelens.refresh()
         end
+        -- formatexpr defaulted to the lsp provider by default recently
+        -- which breaks `gq` and company paragraph formatting in non lsp
+        -- contexts.
+        vim.bo[args.buf].formatexpr = ""
     end,
 })
 
 vim.api.nvim_create_autocmd({ 'BufEnter', 'InsertLeave', 'CursorHold' }, {
-    callback = function(_)
-        local clients = vim.lsp.get_active_clients()
+    callback = function(args)
+        local clients = vim.lsp.get_clients({ bufnr = args.buf })
         for cid = 1, #clients do
+            ---@diagnostic disable-next-line: undefined-field
             if clients[cid].server_capabilities.codelens then
                 vim.lsp.codelens.refresh()
                 break
@@ -255,31 +281,25 @@ vim.api.nvim_create_autocmd({ 'BufEnter', 'InsertLeave', 'CursorHold' }, {
 })
 
 -- LSP Diagnostics Options Setup
-local sign = function(opts)
-    vim.fn.sign_define(opts.name, {
-        texthl = opts.name,
-        text = opts.text,
-        numhl = ''
-    })
-end
-
-sign({ name = 'DiagnosticSignError', text = '🔥' })
-sign({ name = 'DiagnosticSignWarn', text = '⚠️' })
-sign({ name = 'DiagnosticSignHint', text = '➡️' })
-sign({ name = 'DiagnosticSignInfo', text = '🗒️' })
-
 vim.diagnostic.config({
     virtual_text = false,
-    signs = true,
     update_in_insert = true,
     underline = true,
     severity_sort = false,
     float = {
         border = 'rounded',
-        source = 'always',
+        source = true,
         header = '',
         prefix = '',
     },
+    signs = {
+        text =  {
+            [vim.diagnostic.severity.ERROR] = '🔥',
+            [vim.diagnostic.severity.WARN] = '⚠️',
+            [vim.diagnostic.severity.HINT] = '➡️',
+            [vim.diagnostic.severity.INFO] = '🗒️',
+        },
+    }
 })
 
 vim.cmd([[
@@ -296,7 +316,7 @@ autocmd CursorHold * lua vim.diagnostic.open_float(nil, { focusable = false })
 -- updatetime: set updatetime for CursorHold
 vim.opt.completeopt = { 'menuone', 'noselect', 'noinsert' }
 vim.opt.shortmess = vim.opt.shortmess + { c = true }
-vim.api.nvim_set_option('updatetime', 300)
+vim.api.nvim_set_option_value('updatetime', 300, { scope = "global" })
 vim.opt.sessionoptions = { 'buffers', 'curdir', 'skiprtp', 'localoptions', 'terminal', 'tabpages' }
 -- Fixed column for diagnostics to appear
 -- Show autodiagnostic popup on cursor hover_range
@@ -320,31 +340,55 @@ require('nvim-treesitter.configs').setup {
         extended_mode = true,
         max_file_lines = nil,
     },
-    --textobjects = {
-    --  enable = true,
-    --  select = {
-    --    enable = true,
-    --    lookahead = true, -- Automatically jump forward to textobj, similar to targets.vim
-    --    keymaps = {
-    --      -- You can use the capture groups defined in textobjects.scm
-    --      ['aa'] = '@parameter.outer',
-    --      ['ia'] = '@parameter.inner',
-    --      ['af'] = '@function.outer',
-    --      ['if'] = '@function.inner',
-    --      ['ac'] = '@class.outer',
-    --      ['ic'] = '@class.inner',
-    --    },
-    --  },
-    --},
-    --incremental_selection = {
-    --  enable = true,
-    --  keymaps = {
-    --    init_selection = '<Leader>c',
-    --    node_incremental = '<Leader>c',
-    --    scope_incremental = '<Leader>ci',
-    --    node_decremental = '<Leader>cx',
-    --  },
-    --},
+    textobjects = {
+      move = {
+        enable = true,
+        set_jumps = true, -- whether to set jumps in the jumplist
+        goto_next_start = {
+          ["]m"] = "@function.outer",
+          ["]]"] = { query = "@class.outer", desc = "Next class start" },
+          --
+          -- You can use regex matching (i.e. lua pattern) and/or pass a list in a "query" key to group multiple queries.
+          ["]o"] = "@loop.*",
+          -- ["]o"] = { query = { "@loop.inner", "@loop.outer" } }
+          --
+          -- You can pass a query group to use query from `queries/<lang>/<query_group>.scm file in your runtime path.
+          -- Below example nvim-treesitter's `locals.scm` and `folds.scm`. They also provide highlights.scm and indent.scm.
+          ["]s"] = { query = "@local.scope", query_group = "locals", desc = "Next scope" },
+          ["]z"] = { query = "@fold", query_group = "folds", desc = "Next fold" },
+        },
+        goto_next_end = {
+          ["]M"] = "@function.outer",
+          ["]["] = "@class.outer",
+        },
+        goto_previous_start = {
+          ["[m"] = "@function.outer",
+          ["[["] = "@class.outer",
+        },
+        goto_previous_end = {
+          ["[M"] = "@function.outer",
+          ["[]"] = "@class.outer",
+        },
+        -- Below will go to either the start or the end, whichever is closer.
+        -- Use if you want more granular movements
+        -- Make it even more gradual by adding multiple queries and regex.
+        goto_next = {
+          ["]d"] = "@conditional.outer",
+        },
+        goto_previous = {
+          ["[d"] = "@conditional.outer",
+        }
+      },
+    },
+    incremental_selection = {
+      enable = true,
+      keymaps = {
+        init_selection = '<Leader>c',
+        node_incremental = '<Leader>c',
+        scope_incremental = '<Leader>ci',
+        node_decremental = '<Leader>cx',
+      },
+    },
 }
 
 require 'treesitter-context'.setup {
@@ -456,7 +500,7 @@ end)
 -- Neogit integration
 -- See https://github.com/NeogitOrg/neogit for configuration information.
 local neogit = require('neogit')
-neogit.setup()
+neogit.setup {}
 
 vim.keymap.set("n", "<Leader>mg", function()
     neogit.open()
@@ -467,38 +511,6 @@ vim.keymap.set("n", "<Leader>ga", function()
     vim.cmd("!git add %")
 end)
 
-require('possession').setup {
-    commands = {
-        save = 'SSave',
-        load = 'SLoad',
-        delete = 'SDelete',
-        list = 'SList',
-    },
-    autosave = {
-        current = true,
-        on_load = true,
-        on_quit = true,
-    },
-    telescope = {
-        list = {
-            default_action = 'load',
-            mappings = {
-                save = { n = '<c-x>', i = '<c-x>' },
-                load = { n = '<c-v>', i = '<c-v>' },
-                delete = { n = '<c-t>', i = '<c-t>' },
-                rename = { n = '<c-r>', i = '<c-r>' },
-            },
-        },
-    },
-}
-
--- Telelscope configuration
-local telescope = require('telescope')
-local telescope_builtins = require('telescope.builtin')
-local telescope_actions = require('telescope.actions')
-local telescope_state = require('telescope.actions.state')
-
-telescope.load_extension('possession')
 -- https://github.com/nvim-telescope/telescope.nvim
 telescope.setup({
     defaults = {
@@ -520,27 +532,24 @@ telescope.setup({
     },
 })
 
-local harpoon = require('harpoon')
-
-harpoon:setup()
 
 local lean = require 'lean'
 
 lean.setup {
     lsp = {
-        on_attach = function(client, bufnr)
+        --                    client, bufnr
+        on_attach = function(_, bufnr)
             local opts = { buffer = bufnr }
             vim.keymap.set({ "n", "v" }, "<Leader>ti", function() vim.cmd("LeanInfoviewToggle") end, opts)
             vim.keymap.set({ "n", "v" }, "<Leader>sg", function() vim.cmd("LeanGoal") end, opts)
             vim.keymap.set({ "n", "v" }, "<Leader>stg", function() vim.cmd("LeanTermGoal") end, opts)
-            vim.api.nvim_buf_set_option(bufnr, 'omnifunc', 'v:lua.vim.lsp.omnifunc')
+            vim.api.nvim_set_option_value('omnifunc', 'v:lua.vim.lsp.omnifunc', { scope = "local", buf = bufnr })
         end
     },
     mappings = true,
 }
 
 -- telescope keymaps
-vim.keymap.set("n", "<Leader>pl", telescope.extensions.possession.list)
 -- TODO(zaphar): Remove this once my muscle memory has set in.
 vim.keymap.set("n", "<Leader>nff", telescope_builtins.fd)
 vim.keymap.set("n", "<Leader>ff", telescope_builtins.fd)
@@ -549,15 +558,13 @@ vim.keymap.set("n", "<Leader>rn", vim.lsp.buf.rename)
 vim.keymap.set("n", "<Leader>sl", telescope_builtins.lsp_workspace_symbols)
 vim.keymap.set("n", "<Leader>dl", telescope_builtins.diagnostics)
 vim.keymap.set("n", "<Leader>rg", telescope_builtins.live_grep)
-vim.keymap.set("n", "<Leader>bl", function() telescope_builtins.buffers({
-    
-}) end)
+vim.keymap.set("n", "<Leader>bl", function()
+    telescope_builtins.buffers({
+    })
+end)
+vim.keymap.set("n", "<leader>lds", telescope_builtins.lsp_document_symbols, { desc = "[D]ocument [S]ymbols" })
+vim.keymap.set("n", "<leader>lws", telescope_builtins.lsp_dynamic_workspace_symbols, { desc = "[W]orkspace [S]ymbols" })
 
--- harpoon keymaps
-vim.keymap.set("n", "<Leader>ha", function() harpoon:list():append() end)
-vim.keymap.set("n", "<Leader>he", function() harpoon.ui:toggle_quick_menu(harpoon:list()) end)
-vim.keymap.set("n", "<Leader>hj", function() harpoon:list():prev() end)
-vim.keymap.set("n", "<Leader>hk", function() harpoon:list():next() end)
 
 -- codelens keymaps
 vim.keymap.set("n", "<Leader>rr", vim.lsp.codelens.run)
@@ -567,6 +574,77 @@ vim.keymap.set("n", "<Leader>tdb", function()
     vim.cmd("DBUIToggle")
 end)
 
+require('lualine').setup {
+    icons_enabled = false,
+    disabled_filetypes = {
+        statusline = {},
+        winbar = {},
+    },
+    sections = {
+        -- left side
+        lualine_a = { 'mode' },
+        lualine_b = { 'filename' },
+        lualine_c = { 'encoding', 'fileformat', 'filetype' },
+        -- right side
+        lualine_x = { 'diagnostics' },
+        lualine_y = { 'progress', 'lsp_progress' },
+        lualine_z = { 'location' }
+    }
+}
+
+-- Hunk diff tree viewer and editor. Replacement for Meld and company
+local hunk = require("hunk")
+hunk.setup({
+    keys = {
+        global = {
+            quit = { "q" },
+            accept = { "<leader><Cr>" },
+            focus_tree = { "<leader>e" },
+        },
+
+        tree = {
+            expand_node = { "l", "<Right>" },
+            collapse_node = { "h", "<Left>" },
+
+            open_file = { "<Cr>" },
+
+            toggle_file = { "a" },
+        },
+
+        diff = {
+            toggle_line = { "a" },
+            toggle_hunk = { "A" },
+        },
+    },
+
+    ui = {
+        tree = {
+            -- Mode can either be `nested` or `flat`
+            mode = "nested",
+            width = 35,
+        },
+        --- Can be either `vertical` or `horizontal`
+        layout = "vertical",
+    },
+
+    icons = {
+        selected = "󰡖",
+        deselected = "",
+        partially_selected = "󰛲",
+
+        folder_open = "",
+        folder_closed = "",
+    },
+
+    -- Called right after each window and buffer are created.
+    --hooks = {
+    --  ---@param _context { buf: number, tree: NuiTree, opts: table }
+    --  on_tree_mount = function(_context) end,
+    --  ---@param _context { buf: number, win: number }
+    --  on_diff_mount = function(_context) end,
+    --},
+})
+
 local dap = require('dap')
 dap.adapters.lldb = {
     type = "executable",
@@ -604,3 +682,128 @@ dap.configurations.cs = {
         end,
     },
 }
+
+local mcphub = require("mcphub")
+
+mcphub.setup({
+    -- This sets vim.g.mcphub_auto_approve to false by default (can also be toggled from the HUB UI with `ga`)
+    config = vim.fn.expand("~/.config/mcphub/servers.json"),
+    auto_approve = true,
+    auto_toggle_mcp_servers = true, -- Let LLMs start and stop MCP servers automatically
+    extensions = {
+        avante = {
+            make_slash_commands = true, -- make /slash commands from MCP server prompts
+        },
+    },
+    cmd = "mcp-hub",
+})
+
+function get_server_list_prompt(hub_instance)
+    -- returns a list of mcp-servers with a `name` and a list of tools with `name`
+    local mcp_tool_prompt = "# MCP SERVERS\n\nThe Model Context Protocol (MCP) enables communication between the system and locally running MCP servers that provide additional tools and resources to extend your capabilities.\n\n# Connected MCP Servers\n\nWhen a server is connected, you can use the server's tools via the `use_mcp_tool` tool, and access the server's resources via the `access_mcp_resource` tool.\nNote: Server names are case sensitive and you should always use the exact full name like `Firecrawl MCP` or `src/user/main/time-mcp` etc\n\n"
+
+    if not hub_instance then
+        return ""
+    end
+
+    local servers = hub_instance:get_servers()
+    if not servers or #servers == 0 then
+        return ""
+    end
+
+    for _, server in ipairs(servers) do
+        mcp_tool_prompt = mcp_tool_prompt .. "## server name: `" .. server.name .. "`\n\n"
+
+        if server.capabilities and server.capabilities.tools and #server.capabilities.tools > 0 then
+            mcp_tool_prompt = mcp_tool_prompt .. "Available tools:\n\n"
+            for _, tool in ipairs(server.capabilities.tools) do
+                mcp_tool_prompt = mcp_tool_prompt .. "- tool name: `" .. tool.name .. "`\n"
+                if tool.description then
+                    mcp_tool_prompt = mcp_tool_prompt .. "  - Description: " .. tool.description .. "\n"
+                end
+            end
+            mcp_tool_prompt = mcp_tool_prompt .. "\n"
+        end
+    end
+
+    return mcp_tool_prompt
+end
+
+function make_avante_system_prompt(hub_instance)
+    return hub_instance and get_server_list_prompt(hub_instance) or ""
+end
+
+function update_avante_system_prompt()
+    local hub_instance = mcphub.get_hub_instance();
+    local system_prompt = make_avante_system_prompt(hub_instance)
+    if system_prompt then
+      require("avante.config").override({system_prompt = system_prompt})
+    end
+end
+
+vim.keymap.set("n", "<Leader>ab", function() require('avante').get().file_selector:add_buffer_files() end)
+vim.keymap.set("n", "<Leader>af", function() require('avante').get().file_selector:add_current_buffer() end)
+
+get_root_dir = function()
+    -- First try to get the root path from LSP
+    local bufnr = vim.api.nvim_get_current_buf()
+    local clients = vim.lsp.get_clients({ bufnr = bufnr })
+    
+    -- Check if we have an active LSP client with a root_dir
+    for _, client in ipairs(clients) do
+        if client.config and client.config.root_dir then
+            return client.config.root_dir
+        end
+    end
+    
+    -- Fall back to file-based detection
+    local root_file = vim.fs.find(function(name, path)
+        return name:match('(pyproject.toml|.sln|Cargo.toml|.git)$')
+    end, { upward = true })[1]
+    
+    return root_file and vim.fs.dirname(root_file) or vim.fn.getcwd()
+end
+
+require('copilot').setup({
+    root_dir = get_root_dir,
+})
+
+require('avante').setup({
+    provider = "claude",
+    mode = "planning",
+    cursor_applying_provider = nil, -- default to whatever provider is configured
+    claude = {
+        endpoint = "https://api.anthropic.com",
+        model = "claude-3-7-sonnet-20250219",
+        timeout = 30000, -- Timeout in milliseconds
+        temperature = 0,
+        max_tokens = 20480,
+    },
+    copilot = {
+        model = "claude-3.7-sonnet",
+    },
+    behavior = {
+        enable_cursor_planning_mode = true,
+    },
+    windows = {
+        ask = {
+            start_insert=false,
+            focus_on_apply="theirs",
+        },
+    },
+    system_prompt = make_avante_system_prompt(mcphub.get_hub_instance()),
+    custom_tools = { require("mcphub.extensions.avante").mcp_tool() },
+    -- Disable these because we'll use the mcphub versions instead
+    --disabled_tools = {
+    --    "list_files",    -- Built-in file operations
+    --    "search_files",
+    --    "read_file",
+    --    "create_file",
+    --    "rename_file",
+    --    "delete_file",
+    --    "create_dir",
+    --    "rename_dir",
+    --    "delete_dir",
+    --    "bash",         -- Built-in terminal access
+    --},
+})

nix/base-system/modules/darwin-monitor.nix

@@ -1,5 +1,24 @@
 { pkgs, lib, config, ...}:
 with lib;
+let
+    mkLauncher = import ../../packages/darwin-launcher.nix { inherit pkgs; };
+    durnitispOutPath = config.services.durnitisp.stdoutPath;
+    durnitispErrPath = config.services.durnitisp.stderrPath;
+    durnitispPidPath = config.services.durnitisp.pidPath;
+        
+    durnitispLauncher = mkLauncher ''
+                    exec ${pkgs.clio}/bin/clio \
+                    --out-path=${durnitispOutPath} \
+                    --err-path=${durnitispErrPath} \
+                    --pid-file=${durnitispPidPath} \
+                    --paranoid \
+                    -- \
+                    ${pkgs.durnitisp}/bin/durnitisp \
+                    --listenHost=${config.services.durnitisp.listen} \
+                    --stunHosts="stun.ekiga.net:3478,stun.schlund.de:3478,stun.voipbuster.com:3478,stun.voipstunt.com:3478,stun.xten.com:3478" \
+                    --pingHosts="google.com,prod.actual.battle.net"
+    '';
+in
 {
 
     options.services.node-exporter = {
@@ -134,10 +153,6 @@ with lib;
         heraclesErrPath = config.services.heracles.stderrPath;
         heraclesPidPath = config.services.heracles.pidPath;
         
-        durnitispOutPath = config.services.durnitisp.stdoutPath;
-        durnitispErrPath = config.services.durnitisp.stderrPath;
-        durnitispPidPath = config.services.durnitisp.pidPath;
-        
         prometheusOutPath = config.services.prometheus.stdoutPath;
         prometheusErrPath = config.services.prometheus.stderrPath;
         prometheusPidPath = config.services.prometheus.pidPath;
@@ -186,18 +201,10 @@ with lib;
         launchd.daemons.durnitisp = mkIf config.services.durnitisp.enable {
             serviceConfig = {
                 ProgramArguments = [
-                    "${pkgs.clio}/bin/clio"
-                    "--out-path=${durnitispOutPath}"
-                    "--err-path=${durnitispErrPath}"
-                    "--pid-file=${durnitispPidPath}"
-                    "--paranoid"
-                    "--"
-                    "${pkgs.durnitisp}/bin/durnitisp"
-                    "--listenHost=${config.services.durnitisp.listen}"
+                    "${durnitispLauncher}"
                 ];
                 #StandardErrorPath = "/var/log/clio.durnitisp.err";
                 #StandardOutPath = "/var/log/clio.durnitisp.out";
-                KeepAlive =  true;
                 RunAtLoad = true;
             };
         };
@@ -205,16 +212,21 @@ with lib;
         launchd.user.agents.prometheus = mkIf config.services.prometheus.enable {
             serviceConfig = {
                 ProgramArguments = [
-                    "${pkgs.clio}/bin/clio"
-                    "--out-path=${prometheusOutPath}"
-                    "--err-path=${prometheusErrPath}"
-                    "--pid-file=${prometheusPidPath}"
-                    "--paranoid"
-                    "--"
-                    "${pkgs.prometheus}/bin/prometheus"
-                    "--web.listen-address=${config.services.prometheus.listen}"
-                    "--config.file=/etc/${config.environment.etc."prometheus.yaml".target}"
-                    "--storage.tsdb.path=${config.services.prometheus.dataPath}/data"
+                    "/bin/sh"
+                    "-c"
+                    ''
+                    /bin/wait4path ${pkgs.clio}/bin/clio && \
+                    exec ${pkgs.clio}/bin/clio \
+                    --out-path=${prometheusOutPath} \
+                    --err-path=${prometheusErrPath} \
+                    --pid-file=${prometheusPidPath} \
+                    --paranoid \
+                    -- \
+                    ${pkgs.prometheus}/bin/prometheus \
+                    --web.listen-address=${config.services.prometheus.listen} \
+                    --config.file=/etc/${config.environment.etc."prometheus.yaml".target} \
+                    --storage.tsdb.path=${config.services.prometheus.dataPath}/data \
+                    ''
                 ];
                 WorkingDirectory = config.services.prometheus.dataPath;
                 WatchPaths = [

nix/base-system/modules/lorri.nix

@@ -0,0 +1,26 @@
+{pkgs, lib, config, ...}:
+with lib;
+let
+    mkLauncher = import ../../packages/darwin-launcher.nix { inherit pkgs; };
+    lorriLauncher = mkLauncher ''
+                    source ${config.system.build.setEnvironment}
+                    exec ${pkgs.lorri}/bin/lorri daemon
+    '';
+in
+{
+    options.services.my-lorri = {
+        enable = mkEnableOption "Enable the lorri agent";
+    };
+
+    config = {
+        launchd.user.agents.lorri = mkIf config.services.my-lorri.enable {
+            serviceConfig = {
+                ProgramArguments = [
+                    "${lorriLauncher}"
+                ];
+                RunAtLoad = true;
+                KeepAlive = true;
+            };
+        };
+    };
+}

nix/base-system/modules/ollama.nix

@@ -0,0 +1,56 @@
+{pkgs, lib, config, ...}:
+with lib;
+let
+    mkLauncher = import ../../packages/darwin-launcher.nix { inherit pkgs; };
+    ollamaLauncher = mkLauncher ''
+                    exec ${pkgs.clio}/bin/clio \
+                    --out-path=${config.services.ollama.stdoutPath} \
+                    --err-path=${config.services.ollama.stdoutPath} \
+                    --pid-file=${config.services.ollama.pidPath} \
+                    --paranoid \
+                    -- \
+                    ${pkgs.ollama}/bin/ollama \
+                    serve
+    '';
+in
+{
+    options.services.ollama = {
+        enable = mkEnableOption "Enable the ollama agent";
+        stdoutPath = mkOption {
+            default = "/Users/${config.services.ollama.user}/config/ollama/out.log";
+        };
+        stderrPath = mkOption {
+            default = "/Users/${config.services.ollama.user}/config/ollama/err.log";
+        };
+        pidPath = mkOption {
+            default = "/Users/${config.services.ollama.user}/config/ollama/ollama.pid";
+        };
+        user = mkOption {
+          default="zaphar";
+        };
+    };
+
+    config = {
+        
+        launchd.user.agents.ollama = mkIf config.services.ollama.enable {
+            serviceConfig = {
+                ProgramArguments = [
+                    "${ollamaLauncher}"
+                ];
+                EnvironmentVariables = {
+                  "OLLAMA_HOST" = "127.0.0.1:11434";
+                  "OLLAMA_MODELS" = "/Users/${config.services.ollama.user}/config/ollama/";
+                };
+                RunAtLoad = true;
+            };
+        };
+        
+        environment.etc."newsyslog.d/org.nixos.ollama.conf" = mkIf config.services.ollama.enable {
+            text = ''
+            # logfilename                          [owner:group]  mode  count  size  when  flags [/pid_file]       [sig_num]
+            ${config.services.ollama.stdoutPath}   zaphar:staff   644   10     1000  *     BJ  ${config.services.ollama.pidPath} 1
+            ${config.services.ollama.stderrPath}   zaphar:staff   644   10     1000  *     BJ  ${config.services.ollama.pidPath} 1
+            '';
+        };
+    };
+}

nix/base-system/modules/vector.nix

@@ -1,5 +1,20 @@
 {pkgs, lib, config, ...}:
 with lib;
+let
+    mkLauncher = import ../../packages/darwin-launcher.nix { inherit pkgs; };
+    vectorLauncher = mkLauncher ''
+                    exec ${pkgs.clio}/bin/clio \
+                    --out-path=${config.services.vector.stdoutPath} \
+                    --err-path=${config.services.vector.stdoutPath} \
+                    --pid-file=${config.services.vector.pidPath} \
+                    --paranoid \
+                    -- \
+                    ${pkgs.vector}/bin/vector \
+                    --verbose \
+                    --watch-config \
+                    --config=/etc/${config.environment.etc."vector.yaml".target}
+    '';
+in
 {
     options.services.vector = {
         enable = mkEnableOption "Enable the vector agent";
@@ -28,18 +43,22 @@ with lib;
         
         launchd.daemons.vector = mkIf config.services.vector.enable {
             serviceConfig = {
-                Program = "${pkgs.vector}/bin/vector";
                 ProgramArguments = [
-                    "--verbose"
-                    "--watch-config"
-                    "--config=/etc/${config.environment.etc."vector.yaml".target}"
+                    "${vectorLauncher}"
                 ];
                 WatchPaths= [
                     "/etc/${config.environment.etc."vector.yaml".target}"
                 ];
-                KeepAlive = true;
                 RunAtLoad = true;
             };
         };
+        
+        environment.etc."newsyslog.d/org.nixos.vector.conf" = mkIf config.services.vector.enable {
+            text = ''
+            # logfilename                          [owner:group]  mode  count  size  when  flags [/pid_file]       [sig_num]
+            ${config.services.vector.stdoutPath}   zaphar:staff   644   10     1000  *     BJ  ${config.services.vector.pidPath} 1
+            ${config.services.vector.stderrPath}   zaphar:staff   644   10     1000  *     BJ  ${config.services.vector.pidPath} 1
+            '';
+        };
     };
 }

nix/base-system/modules/victoria-logs.nix

@@ -8,6 +8,14 @@ with lib;
             description = "Logging directory path for victoria-logs service";
             default = "/Users/Zaphar/opt/victoria-logs";
            };
+           maxStorageSize = mkOption {
+            description = "Maximum storage size on disk [KB, MB, GB]";
+            default = "200GiB";
+           };
+           retentionTime = mkOption {
+            description = "Timespan of logs to retain, Logs older than this will be dropped.";
+            default = "5d";
+           };
            listenAddr = mkOption {
             description = "Socket Address to listen on";
             default = "127.0.0.1:9428";
@@ -41,6 +49,8 @@ with lib;
                     "${pkgs.victoria-logs}/bin/victoria-logs"
                     "-logNewStreams"
                     "-storageDataPath=${config.services.victoria-logs.dataPath}/data"
+                    "-retention.maxDiskSpaceUsageBytes=${config.services.victoria-logs.maxStorageSize}"
+                    "-retentionPeriod=${config.services.victoria-logs.retentionTime}"
                     "-httpListenAddr=${config.services.victoria-logs.listenAddr}"
                 ];
                 KeepAlive = true;

nix/base-system/nvim-treesitter-csharp.nix

@@ -1,11 +1,16 @@
-{ buildGrammar, fetchFromGitHub, pkgs, }:
-buildGrammar {
-    language = "c-sharp";
-    version = "0.20.0-master";
+{ buildGrammar, fetchFromGitHub, grammarToPlugin, }:
+let grammar = buildGrammar {
+    language = "c_sharp";
+    version = "0.23.1-master";
     src = fetchFromGitHub {
-        owner = "tree-sitter";
-        repo = "tree-sitter-c-sharp";
-        rev = "1648e21b4f087963abf0101ee5221bb413107b07";
-        hash = "sha256-WvkHtw8t14UNqiJvmS9dbGYQSVVzHS9mcWzxq+KLMnU=";
-    };
+		  owner = "tree-sitter";
+		  repo = "tree-sitter-c-sharp";
+		  rev = "b27b091bfdc5f16d0ef76421ea5609c82a57dff0";
+		  hash = "sha256-kSbMv6fKELB5CTSevD1umUgKfb3rsucEnAVYHFiAHss=";
+		};
+};
+in
+{
+	inherit grammar;
+  neovim-plugin = grammarToPlugin grammar;
 }

nix/base-system/tmux.conf

@@ -10,7 +10,8 @@ set-option -g prefix C-a
 #sest -g utf8 on
 
 ## we like colors
-set -g default-terminal "screen-256color"
+set -g default-terminal xterm-256color
+set -ga terminal-overrides ",xterm-256color:RGB"
 
 ## Useful KeyBindings
 

nix/base-system/zshrc

@@ -0,0 +1,54 @@
+set -o vi
+export PROMPT='%F{green}[%T] %F{cyan}(%n@%m) %F{lightgrey}(%y) %F{cyan} %~
+%F{white}%(!.>>.$>) '
+
+# Alwoys use C-R for history search backward
+bindkey '^R' history-incremental-search-backward
+
+# Opam configurattion
+[[ ! -r ~/.opam/opam-init/init.zsh ]] || source ~/.opam/opam-init/init.zsh  > /dev/null 2> /dev/null
+
+# dotnet stuff
+if [ -f "$HOME/Library/Application Support/dnvm/env" ]; then
+    . "$HOME/Library/Application Support/dnvm/env"
+fi
+
+function service_restart() {
+	launchctl kickstart -k $1
+}
+
+function root_shell() {
+    sudo -E zsh -i /etc/zshrc
+}
+
+function wrkspc() {
+    local wd=${1:-$(pwd)}
+    cd ${wd}
+    local session=$(basename $wd)
+    tmux new -A -s $session
+}
+
+function kill_service_on_port() {
+    local port=$1
+    echo killings pids for port ${port}
+    for p in $(sudo lsof -nP -iTCP -sTCP:LISTEN | grep ${port} | awk '{ print $2 }'); do
+        echo killing pid: $p;
+        kill -9 $p;
+    done
+}
+
+function disk_usage() {
+    local path=${1:-.}
+    /run/current-system/sw/bin/du --max-depth=1 -h "${path}" 2>/dev/null
+}
+
+# TODO(zaphar): Figure out why this thing doesn't come up or dies
+function restart_durnitisp() {
+    sudo launchctl bootout system/org.nixos.durnitisp
+    sudo launchctl bootstrap system /Library/LaunchDaemons/org.nixos.durnitisp.plist org.nixos.durnitisp
+}
+
+eval "$(direnv hook zsh)"
+
+export ANTHROPIC_API_KEY="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"
+export OPENAI_API_KEY="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"

nix/packages/darwin-launcher.nix

@@ -0,0 +1,6 @@
+{ pkgs }:
+with pkgs;
+contents: writeShellScript "launcher.sh" ''
+    /bin/wait4path /nix/store && \
+    ${contents}
+''

nix/packages/quint/default.nix

@@ -0,0 +1,17 @@
+# This file has been generated by node2nix 1.11.1. Do not edit!
+
+{pkgs ? import <nixpkgs> {
+    inherit system;
+  }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs_18"}:
+
+let
+  nodeEnv = import ./node-env.nix {
+    inherit (pkgs) stdenv lib python2 runCommand writeTextFile writeShellScript;
+    inherit pkgs nodejs;
+    libtool = if pkgs.stdenv.isDarwin then pkgs.cctools or pkgs.darwin.cctools else null;
+  };
+in
+import ./node-packages.nix {
+  inherit (pkgs) fetchurl nix-gitignore stdenv lib fetchgit;
+  inherit nodeEnv;
+}

nix/packages/quint/node-env.nix

@@ -0,0 +1,689 @@
+# This file originates from node2nix
+
+{lib, stdenv, nodejs, python2, pkgs, libtool, runCommand, writeTextFile, writeShellScript}:
+
+let
+  # Workaround to cope with utillinux in Nixpkgs 20.09 and util-linux in Nixpkgs master
+  utillinux = if pkgs ? utillinux then pkgs.utillinux else pkgs.util-linux;
+
+  python = if nodejs ? python then nodejs.python else python2;
+
+  # Create a tar wrapper that filters all the 'Ignoring unknown extended header keyword' noise
+  tarWrapper = runCommand "tarWrapper" {} ''
+    mkdir -p $out/bin
+
+    cat > $out/bin/tar <<EOF
+    #! ${stdenv.shell} -e
+    $(type -p tar) "\$@" --warning=no-unknown-keyword --delay-directory-restore
+    EOF
+
+    chmod +x $out/bin/tar
+  '';
+
+  # Function that generates a TGZ file from a NPM project
+  buildNodeSourceDist =
+    { name, version, src, ... }:
+
+    stdenv.mkDerivation {
+      name = "node-tarball-${name}-${version}";
+      inherit src;
+      buildInputs = [ nodejs ];
+      buildPhase = ''
+        export HOME=$TMPDIR
+        tgzFile=$(npm pack | tail -n 1) # Hooks to the pack command will add output (https://docs.npmjs.com/misc/scripts)
+      '';
+      installPhase = ''
+        mkdir -p $out/tarballs
+        mv $tgzFile $out/tarballs
+        mkdir -p $out/nix-support
+        echo "file source-dist $out/tarballs/$tgzFile" >> $out/nix-support/hydra-build-products
+      '';
+    };
+
+  # Common shell logic
+  installPackage = writeShellScript "install-package" ''
+    installPackage() {
+      local packageName=$1 src=$2
+
+      local strippedName
+
+      local DIR=$PWD
+      cd $TMPDIR
+
+      unpackFile $src
+
+      # Make the base dir in which the target dependency resides first
+      mkdir -p "$(dirname "$DIR/$packageName")"
+
+      if [ -f "$src" ]
+      then
+          # Figure out what directory has been unpacked
+          packageDir="$(find . -maxdepth 1 -type d | tail -1)"
+
+          # Restore write permissions to make building work
+          find "$packageDir" -type d -exec chmod u+x {} \;
+          chmod -R u+w "$packageDir"
+
+          # Move the extracted tarball into the output folder
+          mv "$packageDir" "$DIR/$packageName"
+      elif [ -d "$src" ]
+      then
+          # Get a stripped name (without hash) of the source directory.
+          # On old nixpkgs it's already set internally.
+          if [ -z "$strippedName" ]
+          then
+              strippedName="$(stripHash $src)"
+          fi
+
+          # Restore write permissions to make building work
+          chmod -R u+w "$strippedName"
+
+          # Move the extracted directory into the output folder
+          mv "$strippedName" "$DIR/$packageName"
+      fi
+
+      # Change to the package directory to install dependencies
+      cd "$DIR/$packageName"
+    }
+  '';
+
+  # Bundle the dependencies of the package
+  #
+  # Only include dependencies if they don't exist. They may also be bundled in the package.
+  includeDependencies = {dependencies}:
+    lib.optionalString (dependencies != []) (
+      ''
+        mkdir -p node_modules
+        cd node_modules
+      ''
+      + (lib.concatMapStrings (dependency:
+        ''
+          if [ ! -e "${dependency.packageName}" ]; then
+              ${composePackage dependency}
+          fi
+        ''
+      ) dependencies)
+      + ''
+        cd ..
+      ''
+    );
+
+  # Recursively composes the dependencies of a package
+  composePackage = { name, packageName, src, dependencies ? [], ... }@args:
+    builtins.addErrorContext "while evaluating node package '${packageName}'" ''
+      installPackage "${packageName}" "${src}"
+      ${includeDependencies { inherit dependencies; }}
+      cd ..
+      ${lib.optionalString (builtins.substring 0 1 packageName == "@") "cd .."}
+    '';
+
+  pinpointDependencies = {dependencies, production}:
+    let
+      pinpointDependenciesFromPackageJSON = writeTextFile {
+        name = "pinpointDependencies.js";
+        text = ''
+          var fs = require('fs');
+          var path = require('path');
+
+          function resolveDependencyVersion(location, name) {
+              if(location == process.env['NIX_STORE']) {
+                  return null;
+              } else {
+                  var dependencyPackageJSON = path.join(location, "node_modules", name, "package.json");
+
+                  if(fs.existsSync(dependencyPackageJSON)) {
+                      var dependencyPackageObj = JSON.parse(fs.readFileSync(dependencyPackageJSON));
+
+                      if(dependencyPackageObj.name == name) {
+                          return dependencyPackageObj.version;
+                      }
+                  } else {
+                      return resolveDependencyVersion(path.resolve(location, ".."), name);
+                  }
+              }
+          }
+
+          function replaceDependencies(dependencies) {
+              if(typeof dependencies == "object" && dependencies !== null) {
+                  for(var dependency in dependencies) {
+                      var resolvedVersion = resolveDependencyVersion(process.cwd(), dependency);
+
+                      if(resolvedVersion === null) {
+                          process.stderr.write("WARNING: cannot pinpoint dependency: "+dependency+", context: "+process.cwd()+"\n");
+                      } else {
+                          dependencies[dependency] = resolvedVersion;
+                      }
+                  }
+              }
+          }
+
+          /* Read the package.json configuration */
+          var packageObj = JSON.parse(fs.readFileSync('./package.json'));
+
+          /* Pinpoint all dependencies */
+          replaceDependencies(packageObj.dependencies);
+          if(process.argv[2] == "development") {
+              replaceDependencies(packageObj.devDependencies);
+          }
+          else {
+              packageObj.devDependencies = {};
+          }
+          replaceDependencies(packageObj.optionalDependencies);
+          replaceDependencies(packageObj.peerDependencies);
+
+          /* Write the fixed package.json file */
+          fs.writeFileSync("package.json", JSON.stringify(packageObj, null, 2));
+        '';
+      };
+    in
+    ''
+      node ${pinpointDependenciesFromPackageJSON} ${if production then "production" else "development"}
+
+      ${lib.optionalString (dependencies != [])
+        ''
+          if [ -d node_modules ]
+          then
+              cd node_modules
+              ${lib.concatMapStrings (dependency: pinpointDependenciesOfPackage dependency) dependencies}
+              cd ..
+          fi
+        ''}
+    '';
+
+  # Recursively traverses all dependencies of a package and pinpoints all
+  # dependencies in the package.json file to the versions that are actually
+  # being used.
+
+  pinpointDependenciesOfPackage = { packageName, dependencies ? [], production ? true, ... }@args:
+    ''
+      if [ -d "${packageName}" ]
+      then
+          cd "${packageName}"
+          ${pinpointDependencies { inherit dependencies production; }}
+          cd ..
+          ${lib.optionalString (builtins.substring 0 1 packageName == "@") "cd .."}
+      fi
+    '';
+
+  # Extract the Node.js source code which is used to compile packages with
+  # native bindings
+  nodeSources = runCommand "node-sources" {} ''
+    tar --no-same-owner --no-same-permissions -xf ${nodejs.src}
+    mv node-* $out
+  '';
+
+  # Script that adds _integrity fields to all package.json files to prevent NPM from consulting the cache (that is empty)
+  addIntegrityFieldsScript = writeTextFile {
+    name = "addintegrityfields.js";
+    text = ''
+      var fs = require('fs');
+      var path = require('path');
+
+      function augmentDependencies(baseDir, dependencies) {
+          for(var dependencyName in dependencies) {
+              var dependency = dependencies[dependencyName];
+
+              // Open package.json and augment metadata fields
+              var packageJSONDir = path.join(baseDir, "node_modules", dependencyName);
+              var packageJSONPath = path.join(packageJSONDir, "package.json");
+
+              if(fs.existsSync(packageJSONPath)) { // Only augment packages that exist. Sometimes we may have production installs in which development dependencies can be ignored
+                  console.log("Adding metadata fields to: "+packageJSONPath);
+                  var packageObj = JSON.parse(fs.readFileSync(packageJSONPath));
+
+                  if(dependency.integrity) {
+                      packageObj["_integrity"] = dependency.integrity;
+                  } else {
+                      packageObj["_integrity"] = "sha1-000000000000000000000000000="; // When no _integrity string has been provided (e.g. by Git dependencies), add a dummy one. It does not seem to harm and it bypasses downloads.
+                  }
+
+                  if(dependency.resolved) {
+                      packageObj["_resolved"] = dependency.resolved; // Adopt the resolved property if one has been provided
+                  } else {
+                      packageObj["_resolved"] = dependency.version; // Set the resolved version to the version identifier. This prevents NPM from cloning Git repositories.
+                  }
+
+                  if(dependency.from !== undefined) { // Adopt from property if one has been provided
+                      packageObj["_from"] = dependency.from;
+                  }
+
+                  fs.writeFileSync(packageJSONPath, JSON.stringify(packageObj, null, 2));
+              }
+
+              // Augment transitive dependencies
+              if(dependency.dependencies !== undefined) {
+                  augmentDependencies(packageJSONDir, dependency.dependencies);
+              }
+          }
+      }
+
+      if(fs.existsSync("./package-lock.json")) {
+          var packageLock = JSON.parse(fs.readFileSync("./package-lock.json"));
+
+          if(![1, 2].includes(packageLock.lockfileVersion)) {
+            process.stderr.write("Sorry, I only understand lock file versions 1 and 2!\n");
+            process.exit(1);
+          }
+
+          if(packageLock.dependencies !== undefined) {
+              augmentDependencies(".", packageLock.dependencies);
+          }
+      }
+    '';
+  };
+
+  # Reconstructs a package-lock file from the node_modules/ folder structure and package.json files with dummy sha1 hashes
+  reconstructPackageLock = writeTextFile {
+    name = "reconstructpackagelock.js";
+    text = ''
+      var fs = require('fs');
+      var path = require('path');
+
+      var packageObj = JSON.parse(fs.readFileSync("package.json"));
+
+      var lockObj = {
+          name: packageObj.name,
+          version: packageObj.version,
+          lockfileVersion: 2,
+          requires: true,
+          packages: {
+              "": {
+                  name: packageObj.name,
+                  version: packageObj.version,
+                  license: packageObj.license,
+                  bin: packageObj.bin,
+                  dependencies: packageObj.dependencies,
+                  engines: packageObj.engines,
+                  optionalDependencies: packageObj.optionalDependencies
+              }
+          },
+          dependencies: {}
+      };
+
+      function augmentPackageJSON(filePath, packages, dependencies) {
+          var packageJSON = path.join(filePath, "package.json");
+          if(fs.existsSync(packageJSON)) {
+              var packageObj = JSON.parse(fs.readFileSync(packageJSON));
+              packages[filePath] = {
+                  version: packageObj.version,
+                  integrity: "sha1-000000000000000000000000000=",
+                  dependencies: packageObj.dependencies,
+                  engines: packageObj.engines,
+                  optionalDependencies: packageObj.optionalDependencies
+              };
+              dependencies[packageObj.name] = {
+                  version: packageObj.version,
+                  integrity: "sha1-000000000000000000000000000=",
+                  dependencies: {}
+              };
+              processDependencies(path.join(filePath, "node_modules"), packages, dependencies[packageObj.name].dependencies);
+          }
+      }
+
+      function processDependencies(dir, packages, dependencies) {
+          if(fs.existsSync(dir)) {
+              var files = fs.readdirSync(dir);
+
+              files.forEach(function(entry) {
+                  var filePath = path.join(dir, entry);
+                  var stats = fs.statSync(filePath);
+
+                  if(stats.isDirectory()) {
+                      if(entry.substr(0, 1) == "@") {
+                          // When we encounter a namespace folder, augment all packages belonging to the scope
+                          var pkgFiles = fs.readdirSync(filePath);
+
+                          pkgFiles.forEach(function(entry) {
+                              if(stats.isDirectory()) {
+                                  var pkgFilePath = path.join(filePath, entry);
+                                  augmentPackageJSON(pkgFilePath, packages, dependencies);
+                              }
+                          });
+                      } else {
+                          augmentPackageJSON(filePath, packages, dependencies);
+                      }
+                  }
+              });
+          }
+      }
+
+      processDependencies("node_modules", lockObj.packages, lockObj.dependencies);
+
+      fs.writeFileSync("package-lock.json", JSON.stringify(lockObj, null, 2));
+    '';
+  };
+
+  # Script that links bins defined in package.json to the node_modules bin directory
+  # NPM does not do this for top-level packages itself anymore as of v7
+  linkBinsScript = writeTextFile {
+    name = "linkbins.js";
+    text = ''
+      var fs = require('fs');
+      var path = require('path');
+
+      var packageObj = JSON.parse(fs.readFileSync("package.json"));
+
+      var nodeModules = Array(packageObj.name.split("/").length).fill("..").join(path.sep);
+
+      if(packageObj.bin !== undefined) {
+          fs.mkdirSync(path.join(nodeModules, ".bin"))
+
+          if(typeof packageObj.bin == "object") {
+              Object.keys(packageObj.bin).forEach(function(exe) {
+                  if(fs.existsSync(packageObj.bin[exe])) {
+                      console.log("linking bin '" + exe + "'");
+                      fs.symlinkSync(
+                          path.join("..", packageObj.name, packageObj.bin[exe]),
+                          path.join(nodeModules, ".bin", exe)
+                      );
+                  }
+                  else {
+                      console.log("skipping non-existent bin '" + exe + "'");
+                  }
+              })
+          }
+          else {
+              if(fs.existsSync(packageObj.bin)) {
+                  console.log("linking bin '" + packageObj.bin + "'");
+                  fs.symlinkSync(
+                      path.join("..", packageObj.name, packageObj.bin),
+                      path.join(nodeModules, ".bin", packageObj.name.split("/").pop())
+                  );
+              }
+              else {
+                  console.log("skipping non-existent bin '" + packageObj.bin + "'");
+              }
+          }
+      }
+      else if(packageObj.directories !== undefined && packageObj.directories.bin !== undefined) {
+          fs.mkdirSync(path.join(nodeModules, ".bin"))
+
+          fs.readdirSync(packageObj.directories.bin).forEach(function(exe) {
+              if(fs.existsSync(path.join(packageObj.directories.bin, exe))) {
+                  console.log("linking bin '" + exe + "'");
+                  fs.symlinkSync(
+                      path.join("..", packageObj.name, packageObj.directories.bin, exe),
+                      path.join(nodeModules, ".bin", exe)
+                  );
+              }
+              else {
+                  console.log("skipping non-existent bin '" + exe + "'");
+              }
+          })
+      }
+    '';
+  };
+
+  prepareAndInvokeNPM = {packageName, bypassCache, reconstructLock, npmFlags, production}:
+    let
+      forceOfflineFlag = if bypassCache then "--offline" else "--registry http://www.example.com";
+    in
+    ''
+        # Pinpoint the versions of all dependencies to the ones that are actually being used
+        echo "pinpointing versions of dependencies..."
+        source $pinpointDependenciesScriptPath
+
+        # Patch the shebangs of the bundled modules to prevent them from
+        # calling executables outside the Nix store as much as possible
+        patchShebangs .
+
+        # Deploy the Node.js package by running npm install. Since the
+        # dependencies have been provided already by ourselves, it should not
+        # attempt to install them again, which is good, because we want to make
+        # it Nix's responsibility. If it needs to install any dependencies
+        # anyway (e.g. because the dependency parameters are
+        # incomplete/incorrect), it fails.
+        #
+        # The other responsibilities of NPM are kept -- version checks, build
+        # steps, postprocessing etc.
+
+        export HOME=$TMPDIR
+        cd "${packageName}"
+        runHook preRebuild
+
+        ${lib.optionalString bypassCache ''
+          ${lib.optionalString reconstructLock ''
+            if [ -f package-lock.json ]
+            then
+                echo "WARNING: Reconstruct lock option enabled, but a lock file already exists!"
+                echo "This will most likely result in version mismatches! We will remove the lock file and regenerate it!"
+                rm package-lock.json
+            else
+                echo "No package-lock.json file found, reconstructing..."
+            fi
+
+            node ${reconstructPackageLock}
+          ''}
+
+          node ${addIntegrityFieldsScript}
+        ''}
+
+        npm ${forceOfflineFlag} --nodedir=${nodeSources} ${npmFlags} ${lib.optionalString production "--production"} rebuild
+
+        runHook postRebuild
+
+        if [ "''${dontNpmInstall-}" != "1" ]
+        then
+            # NPM tries to download packages even when they already exist if npm-shrinkwrap is used.
+            rm -f npm-shrinkwrap.json
+
+            npm ${forceOfflineFlag} --nodedir=${nodeSources} --no-bin-links --ignore-scripts ${npmFlags} ${lib.optionalString production "--production"} install
+        fi
+
+        # Link executables defined in package.json
+        node ${linkBinsScript}
+    '';
+
+  # Builds and composes an NPM package including all its dependencies
+  buildNodePackage =
+    { name
+    , packageName
+    , version ? null
+    , dependencies ? []
+    , buildInputs ? []
+    , production ? true
+    , npmFlags ? ""
+    , dontNpmInstall ? false
+    , bypassCache ? false
+    , reconstructLock ? false
+    , preRebuild ? ""
+    , dontStrip ? true
+    , unpackPhase ? "true"
+    , buildPhase ? "true"
+    , meta ? {}
+    , ... }@args:
+
+    let
+      extraArgs = removeAttrs args [ "name" "dependencies" "buildInputs" "dontStrip" "dontNpmInstall" "preRebuild" "unpackPhase" "buildPhase" "meta" ];
+    in
+    stdenv.mkDerivation ({
+      name = "${name}${if version == null then "" else "-${version}"}";
+      buildInputs = [ tarWrapper python nodejs ]
+        ++ lib.optional (stdenv.isLinux) utillinux
+        ++ lib.optional (stdenv.isDarwin) libtool
+        ++ buildInputs;
+
+      inherit nodejs;
+
+      inherit dontStrip; # Stripping may fail a build for some package deployments
+      inherit dontNpmInstall preRebuild unpackPhase buildPhase;
+
+      compositionScript = composePackage args;
+      pinpointDependenciesScript = pinpointDependenciesOfPackage args;
+
+      passAsFile = [ "compositionScript" "pinpointDependenciesScript" ];
+
+      installPhase = ''
+        source ${installPackage}
+
+        # Create and enter a root node_modules/ folder
+        mkdir -p $out/lib/node_modules
+        cd $out/lib/node_modules
+
+        # Compose the package and all its dependencies
+        source $compositionScriptPath
+
+        ${prepareAndInvokeNPM { inherit packageName bypassCache reconstructLock npmFlags production; }}
+
+        # Create symlink to the deployed executable folder, if applicable
+        if [ -d "$out/lib/node_modules/.bin" ]
+        then
+            ln -s $out/lib/node_modules/.bin $out/bin
+
+            # Fixup all executables
+            ls $out/bin/* | while read i
+            do
+                file="$(readlink -f "$i")"
+                chmod u+rwx "$file"
+                if isScript "$file"
+                then
+                    sed -i 's/\r$//' "$file"  # convert crlf to lf
+                fi
+            done
+        fi
+
+        # Create symlinks to the deployed manual page folders, if applicable
+        if [ -d "$out/lib/node_modules/${packageName}/man" ]
+        then
+            mkdir -p $out/share
+            for dir in "$out/lib/node_modules/${packageName}/man/"*
+            do
+                mkdir -p $out/share/man/$(basename "$dir")
+                for page in "$dir"/*
+                do
+                    ln -s $page $out/share/man/$(basename "$dir")
+                done
+            done
+        fi
+
+        # Run post install hook, if provided
+        runHook postInstall
+      '';
+
+      meta = {
+        # default to Node.js' platforms
+        platforms = nodejs.meta.platforms;
+      } // meta;
+    } // extraArgs);
+
+  # Builds a node environment (a node_modules folder and a set of binaries)
+  buildNodeDependencies =
+    { name
+    , packageName
+    , version ? null
+    , src
+    , dependencies ? []
+    , buildInputs ? []
+    , production ? true
+    , npmFlags ? ""
+    , dontNpmInstall ? false
+    , bypassCache ? false
+    , reconstructLock ? false
+    , dontStrip ? true
+    , unpackPhase ? "true"
+    , buildPhase ? "true"
+    , ... }@args:
+
+    let
+      extraArgs = removeAttrs args [ "name" "dependencies" "buildInputs" ];
+    in
+      stdenv.mkDerivation ({
+        name = "node-dependencies-${name}${if version == null then "" else "-${version}"}";
+
+        buildInputs = [ tarWrapper python nodejs ]
+          ++ lib.optional (stdenv.isLinux) utillinux
+          ++ lib.optional (stdenv.isDarwin) libtool
+          ++ buildInputs;
+
+        inherit dontStrip; # Stripping may fail a build for some package deployments
+        inherit dontNpmInstall unpackPhase buildPhase;
+
+        includeScript = includeDependencies { inherit dependencies; };
+        pinpointDependenciesScript = pinpointDependenciesOfPackage args;
+
+        passAsFile = [ "includeScript" "pinpointDependenciesScript" ];
+
+        installPhase = ''
+          source ${installPackage}
+
+          mkdir -p $out/${packageName}
+          cd $out/${packageName}
+
+          source $includeScriptPath
+
+          # Create fake package.json to make the npm commands work properly
+          cp ${src}/package.json .
+          chmod 644 package.json
+          ${lib.optionalString bypassCache ''
+            if [ -f ${src}/package-lock.json ]
+            then
+                cp ${src}/package-lock.json .
+                chmod 644 package-lock.json
+            fi
+          ''}
+
+          # Go to the parent folder to make sure that all packages are pinpointed
+          cd ..
+          ${lib.optionalString (builtins.substring 0 1 packageName == "@") "cd .."}
+
+          ${prepareAndInvokeNPM { inherit packageName bypassCache reconstructLock npmFlags production; }}
+
+          # Expose the executables that were installed
+          cd ..
+          ${lib.optionalString (builtins.substring 0 1 packageName == "@") "cd .."}
+
+          mv ${packageName} lib
+          ln -s $out/lib/node_modules/.bin $out/bin
+        '';
+      } // extraArgs);
+
+  # Builds a development shell
+  buildNodeShell =
+    { name
+    , packageName
+    , version ? null
+    , src
+    , dependencies ? []
+    , buildInputs ? []
+    , production ? true
+    , npmFlags ? ""
+    , dontNpmInstall ? false
+    , bypassCache ? false
+    , reconstructLock ? false
+    , dontStrip ? true
+    , unpackPhase ? "true"
+    , buildPhase ? "true"
+    , ... }@args:
+
+    let
+      nodeDependencies = buildNodeDependencies args;
+      extraArgs = removeAttrs args [ "name" "dependencies" "buildInputs" "dontStrip" "dontNpmInstall" "unpackPhase" "buildPhase" ];
+    in
+    stdenv.mkDerivation ({
+      name = "node-shell-${name}${if version == null then "" else "-${version}"}";
+
+      buildInputs = [ python nodejs ] ++ lib.optional (stdenv.isLinux) utillinux ++ buildInputs;
+      buildCommand = ''
+        mkdir -p $out/bin
+        cat > $out/bin/shell <<EOF
+        #! ${stdenv.shell} -e
+        $shellHook
+        exec ${stdenv.shell}
+        EOF
+        chmod +x $out/bin/shell
+      '';
+
+      # Provide the dependencies in a development shell through the NODE_PATH environment variable
+      inherit nodeDependencies;
+      shellHook = lib.optionalString (dependencies != []) ''
+        export NODE_PATH=${nodeDependencies}/lib/node_modules
+        export PATH="${nodeDependencies}/bin:$PATH"
+      '';
+    } // extraArgs);
+in
+{
+  buildNodeSourceDist = lib.makeOverridable buildNodeSourceDist;
+  buildNodePackage = lib.makeOverridable buildNodePackage;
+  buildNodeDependencies = lib.makeOverridable buildNodeDependencies;
+  buildNodeShell = lib.makeOverridable buildNodeShell;
+}

nix/packages/quint/node-packages.json

@@ -0,0 +1,4 @@
+[
+	"@informalsystems/quint",
+	"@informalsystems/quint-language-server"
+]

nix/packages/quint/node-packages.nix

@@ -0,0 +1,970 @@
+# This file has been generated by node2nix 1.11.1. Do not edit!
+
+{nodeEnv, fetchurl, fetchgit, nix-gitignore, stdenv, lib, globalBuildInputs ? []}:
+
+let
+  sources = {
+    "@grpc/grpc-js-1.11.1" = {
+      name = "_at_grpc_slash_grpc-js";
+      packageName = "@grpc/grpc-js";
+      version = "1.11.1";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@grpc/grpc-js/-/grpc-js-1.11.1.tgz";
+        sha512 = "gyt/WayZrVPH2w/UTLansS7F9Nwld472JxxaETamrM8HNlsa+jSLNyKAZmhxI2Me4c3mQHFiS1wWHDY1g1Kthw==";
+      };
+    };
+    "@grpc/proto-loader-0.7.13" = {
+      name = "_at_grpc_slash_proto-loader";
+      packageName = "@grpc/proto-loader";
+      version = "0.7.13";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@grpc/proto-loader/-/proto-loader-0.7.13.tgz";
+        sha512 = "AiXO/bfe9bmxBjxxtYxFAXGZvMaN5s8kO+jBHAJCON8rJoB5YS/D6X7ZNc6XQkuHNmyl4CYaMI1fJ/Gn27RGGw==";
+      };
+    };
+    "@informalsystems/quint-0.20.0" = {
+      name = "_at_informalsystems_slash_quint";
+      packageName = "@informalsystems/quint";
+      version = "0.20.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@informalsystems/quint/-/quint-0.20.0.tgz";
+        sha512 = "q3jxvzVw0hw4yxOJcGzAMIguGfcyScs/BP5efqCxQeVMDxLsqy+SAgLH5CnM7UNJFXLawwuyRaCbIvq9+2BXRg==";
+      };
+    };
+    "@js-sdsl/ordered-map-4.4.2" = {
+      name = "_at_js-sdsl_slash_ordered-map";
+      packageName = "@js-sdsl/ordered-map";
+      version = "4.4.2";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@js-sdsl/ordered-map/-/ordered-map-4.4.2.tgz";
+        sha512 = "iUKgm52T8HOE/makSxjqoWhe95ZJA1/G1sYsGev2JDKUSS14KAgg1LHb+Ba+IPow0xflbnSkOsZcO08C7w1gYw==";
+      };
+    };
+    "@octokit/endpoint-9.0.5" = {
+      name = "_at_octokit_slash_endpoint";
+      packageName = "@octokit/endpoint";
+      version = "9.0.5";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@octokit/endpoint/-/endpoint-9.0.5.tgz";
+        sha512 = "ekqR4/+PCLkEBF6qgj8WqJfvDq65RH85OAgrtnVp1mSxaXF03u2xW/hUdweGS5654IlC0wkNYC18Z50tSYTAFw==";
+      };
+    };
+    "@octokit/openapi-types-22.2.0" = {
+      name = "_at_octokit_slash_openapi-types";
+      packageName = "@octokit/openapi-types";
+      version = "22.2.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@octokit/openapi-types/-/openapi-types-22.2.0.tgz";
+        sha512 = "QBhVjcUa9W7Wwhm6DBFu6ZZ+1/t/oYxqc2tp81Pi41YNuJinbFRx8B133qVOrAaBbF7D/m0Et6f9/pZt9Rc+tg==";
+      };
+    };
+    "@octokit/request-8.4.0" = {
+      name = "_at_octokit_slash_request";
+      packageName = "@octokit/request";
+      version = "8.4.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@octokit/request/-/request-8.4.0.tgz";
+        sha512 = "9Bb014e+m2TgBeEJGEbdplMVWwPmL1FPtggHQRkV+WVsMggPtEkLKPlcVYm/o8xKLkpJ7B+6N8WfQMtDLX2Dpw==";
+      };
+    };
+    "@octokit/request-error-5.1.0" = {
+      name = "_at_octokit_slash_request-error";
+      packageName = "@octokit/request-error";
+      version = "5.1.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@octokit/request-error/-/request-error-5.1.0.tgz";
+        sha512 = "GETXfE05J0+7H2STzekpKObFe765O5dlAKUTLNGeH+x47z7JjXHfsHKo5z21D/o/IOZTUEI6nyWyR+bZVP/n5Q==";
+      };
+    };
+    "@octokit/types-13.5.0" = {
+      name = "_at_octokit_slash_types";
+      packageName = "@octokit/types";
+      version = "13.5.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@octokit/types/-/types-13.5.0.tgz";
+        sha512 = "HdqWTf5Z3qwDVlzCrP8UJquMwunpDiMPt5er+QjGzL4hqr/vBVY/MauQgS1xWxCDT1oMx1EULyqxncdCY/NVSQ==";
+      };
+    };
+    "@protobufjs/aspromise-1.1.2" = {
+      name = "_at_protobufjs_slash_aspromise";
+      packageName = "@protobufjs/aspromise";
+      version = "1.1.2";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@protobufjs/aspromise/-/aspromise-1.1.2.tgz";
+        sha512 = "j+gKExEuLmKwvz3OgROXtrJ2UG2x8Ch2YZUxahh+s1F2HZ+wAceUNLkvy6zKCPVRkU++ZWQrdxsUeQXmcg4uoQ==";
+      };
+    };
+    "@protobufjs/base64-1.1.2" = {
+      name = "_at_protobufjs_slash_base64";
+      packageName = "@protobufjs/base64";
+      version = "1.1.2";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@protobufjs/base64/-/base64-1.1.2.tgz";
+        sha512 = "AZkcAA5vnN/v4PDqKyMR5lx7hZttPDgClv83E//FMNhR2TMcLUhfRUBHCmSl0oi9zMgDDqRUJkSxO3wm85+XLg==";
+      };
+    };
+    "@protobufjs/codegen-2.0.4" = {
+      name = "_at_protobufjs_slash_codegen";
+      packageName = "@protobufjs/codegen";
+      version = "2.0.4";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/@protobufjs/codegen/-/codegen-2.0.4.tgz";
+        sha512 = "YyFaikqM5sH0ziFZCN3xDC7zeGaB/d0IUb9CATugHWbd1FRFwWwt4ld4OYMPWu5a3Xe01mGAULCdqhMlPl29Jg==";
+      };
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+      sources."vscode-languageserver-protocol-3.16.0"
+      sources."vscode-languageserver-textdocument-1.0.12"
+      sources."vscode-languageserver-types-3.16.0"
+      sources."vscode-uri-3.0.8"
+      sources."wrap-ansi-7.0.0"
+      sources."wrappy-1.0.2"
+      sources."y18n-5.0.8"
+      sources."yallist-4.0.0"
+      sources."yargs-17.7.2"
+      sources."yargs-parser-21.1.1"
+    ];
+    buildInputs = globalBuildInputs;
+    meta = {
+      description = "Language Server for the Quint specification language";
+      homepage = "https://github.com/informalsystems/quint#readme";
+      license = "Apache 2.0";
+    };
+    production = true;
+    bypassCache = true;
+    reconstructLock = true;
+  };
+}

nix/packages/vfkit.nix

@@ -0,0 +1,39 @@
+{ lib, fetchurl, stdenvNoCC, testers }:
+
+stdenvNoCC.mkDerivation (finalAttrs: {
+  pname = "vfkit";
+  version = "0.5.1";
+
+  src = fetchurl {
+    url = "https://github.com/crc-org/vfkit/releases/download/v${finalAttrs.version}/vfkit";
+    hash = "sha256-at+KsvsKO359d4VUvcSuio2ej5hM6//U4Mj/jqXwhEc=";
+  };
+
+  dontUnpack = true;
+
+  installPhase = ''
+    runHook preInstall
+
+    install -Dm755 $src $out/bin/vfkit
+
+    runHook postInstall
+  '';
+
+  passthru.tests = {
+    version = testers.testVersion {
+      package = finalAttrs.finalPackage;
+    };
+  };
+
+  meta = {
+    description = "Simple command line tool to start VMs through virtualization framework";
+    homepage = "https://github.com/crc-org/vfkit";
+    license = lib.licenses.asl20;
+    maintainers = [ ];
+    platforms = lib.platforms.darwin;
+    # Source build will be possible after darwin SDK 12.0 bump
+    # https://github.com/NixOS/nixpkgs/pull/229210
+    sourceProvenance = [ lib.sourceTypes.binaryNativeCode ];
+    mainProgram = "vfkit";
+  };
+})

nix/packages/victoria-logs.nix

@@ -2,13 +2,13 @@
 with pkgs;
 buildGoModule rec {
   pname = "VictoriaMetrics";
-  version = "0.17.0-victorialogs";
+  version = "0.28.0-victorialogs";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
     rev = "v${version}";
-    hash = "sha256-Ps55tCEw2UQch7yKJ1zYEtEE6fEE0ahhIiagt/hFxpo=";
+    hash = "sha256-QCBUvUABx/+85HEfhDbuCHiVgP3lNBUdJ2BnspvRFHE=";
   };
 
   vendorHash = null;
@@ -26,7 +26,7 @@ buildGoModule rec {
 
     # allow any go 1.22 version
     substituteInPlace go.mod \
-      --replace "go 1.22.4" "go 1.22"
+      --replace-fail "go 1.22.5" "go 1.22"
 
     # Increase timeouts in tests to prevent failure on heavily loaded builders
     substituteInPlace lib/storage/storage_test.go \